Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022810 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:9969520-9974510 (+) |
| Description | Similar to VAD1: Protein VASCULAR ASSOCIATED DEATH 1%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022810 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 22 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g02120 |
Involved in ethylene- and salicylic acid-dependent cell death control associated with cells in the vicinity of vascular bundles. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009626 | plant-type hypersensitive response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.634; coverage=87.424; evalue=3.71e-145; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009723 | response to ethylene | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.634; coverage=87.424; evalue=3.71e-145; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009751 | response to salicylic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.634; coverage=87.424; evalue=3.71e-145; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009873 | ethylene-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.634; coverage=87.424; evalue=3.71e-145; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032366 | intracellular sterol transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.124; coverage=60.909; evalue=3.67e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042632 | cholesterol homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.488; coverage=63.333; evalue=5.67e-13; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.634; coverage=87.424; evalue=3.71e-145; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043069 | negative regulation of programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.634; coverage=87.424; evalue=3.71e-145; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071397 | cellular response to cholesterol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.124; coverage=60.909; evalue=3.67e-18; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090120 | lysosome to ER cholesterol transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.488; coverage=63.333; evalue=5.67e-13; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.634; coverage=87.424; evalue=3.71e-145; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.634; coverage=87.424; evalue=3.71e-145; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.634; coverage=87.424; evalue=3.71e-145; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.124; coverage=60.909; evalue=3.67e-18; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.124; coverage=60.909; evalue=3.67e-18; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.634; coverage=87.424; evalue=3.71e-145; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.634; coverage=87.424; evalue=3.71e-145; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140268 | endoplasmic reticulum-plasma membrane contact site | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.124; coverage=60.909; evalue=3.67e-18; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001786 | phosphatidylserine binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.488; coverage=63.333; evalue=5.67e-13; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015485 | cholesterol binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.124; coverage=60.909; evalue=3.67e-18; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070300 | phosphatidic acid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.488; coverage=63.333; evalue=5.67e-13; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120020 | cholesterol transfer activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.124; coverage=60.909; evalue=3.67e-18; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G02120 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.634; coverage=87.424; evalue=3.71e-145 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:54762 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.765; coverage=64.394; evalue=4.33e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:207798 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.124; coverage=60.909; evalue=3.67e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:235283 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.488; coverage=63.333; evalue=5.67e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100172272 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.986; coverage=63.939; evalue=2.79e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release |