Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022583 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:1977913-1980086 (+) |
| Description | Similar to CDC48C: Cell division control protein 48 homolog C (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022583 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 22 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g01610 |
Probably functions in cell division and growth processes. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000055 | ribosomal large subunit export from nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=29.53; coverage=111.61; evalue=2.04e-27; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.736; coverage=97.753; evalue=6.61e-26; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.086; coverage=100.749; evalue=5.88e-36; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032092 | positive regulation of protein binding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.736; coverage=97.753; evalue=6.61e-26; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032206 | positive regulation of telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.736; coverage=97.753; evalue=6.61e-26; UniProt GO evidence=IMP:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042254 | ribosome biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.086; coverage=100.749; evalue=5.88e-36; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042273 | ribosomal large subunit biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=29.53; coverage=111.61; evalue=2.04e-27; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.086; coverage=100.749; evalue=5.88e-36; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0180023 | cytosolic large ribosomal subunit assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.472; coverage=87.266; evalue=6.35e-26; UniProt GO evidence=TAS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904749 | regulation of protein localization to nucleolus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.736; coverage=97.753; evalue=6.61e-26; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905323 | telomerase holoenzyme complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.736; coverage=97.753; evalue=6.61e-26; UniProt GO evidence=IMP:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.086; coverage=100.749; evalue=5.88e-36; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.736; coverage=97.753; evalue=6.61e-26; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005697 | telomerase holoenzyme complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.736; coverage=97.753; evalue=6.61e-26; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=29.53; coverage=111.61; evalue=2.04e-27; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009524 | phragmoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.086; coverage=100.749; evalue=5.88e-36; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.736; coverage=97.753; evalue=6.61e-26; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030687 | preribosome, large subunit precursor | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=29.53; coverage=111.61; evalue=2.04e-27; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.736; coverage=97.753; evalue=6.61e-26; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.086; coverage=100.749; evalue=5.88e-36; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.086; coverage=100.749; evalue=5.88e-36; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990275 | preribosome binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.086; coverage=100.749; evalue=5.88e-36; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G01610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.086; coverage=100.749; evalue=5.88e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:4931 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.736; coverage=97.753; evalue=6.61e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YLL034C | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=29.53; coverage=111.61; evalue=2.04e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2539968 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.472; coverage=87.266; evalue=6.35e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release |