Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_021713 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:135697358-135698839 (+) |
| Description | Similar to At5g62290: Chloride conductance regulatory protein ICln (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_021713 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 27 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g62290 |
May participate in cellular volume control by activation of a swelling-induced chloride conductance pathway. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000387 | spliceosomal snRNP assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000398 | mRNA splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006821 | chloride transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006884 | cell volume homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045292 | mRNA cis splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048026 | positive regulation of mRNA splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.143; coverage=41.502; evalue=1.91e-14; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.143; coverage=41.502; evalue=1.91e-14; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005681 | spliceosomal complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005856 | cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.594; coverage=50.593; evalue=2.47e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005929 | cilium | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.143; coverage=41.502; evalue=1.91e-14; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015630 | microtubule cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.143; coverage=41.502; evalue=1.91e-14; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.594; coverage=50.593; evalue=2.47e-14; UniProt GO evidence=IDA:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.594; coverage=50.593; evalue=2.47e-14; UniProt GO evidence=IDA:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034709 | methylosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034715 | pICln-Sm protein complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097225 | sperm midpiece | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.143; coverage=41.502; evalue=1.91e-14; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097228 | sperm principal piece | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.143; coverage=41.502; evalue=1.91e-14; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120212 | sperm head-tail coupling apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.143; coverage=41.502; evalue=1.91e-14; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005229 | intracellularly calcium-gated chloride channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.594; coverage=50.593; evalue=2.47e-14; UniProt GO evidence=IMP:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005267 | potassium channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.594; coverage=50.593; evalue=2.47e-14; UniProt GO evidence=IMP:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008289 | lipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.594; coverage=50.593; evalue=2.47e-14; UniProt GO evidence=EXP:DisProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036094 | small molecule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.594; coverage=50.593; evalue=2.47e-14; UniProt GO evidence=EXP:DisProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990935 | splicing factor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.594; coverage=50.593; evalue=2.47e-14; UniProt GO evidence=IPI:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G62290 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.397; coverage=95.652; evalue=1.39e-87 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cfa:403971 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.594; coverage=50.593; evalue=2.47e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:65160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.143; coverage=41.502; evalue=4.02e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release |