Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_021438 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:129761614-129765900 (-) |
| Description | Similar to GABA-TP3: Gamma aminobutyrate transaminase 3%2C chloroplastic (Solanum lycopersicum OX%3D4081) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_021438 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 8 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os04g0614600 |
Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate as amino-group acceptor, but not 2-oxoglutarate. | No verified direct reference in this release |
UniProt: B8BBZ7 |
Transaminase that degrades gamma-amino butyric acid (GABA). | No verified direct reference in this release |
UniProt: Q01K11 |
Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate as amino-group acceptor, but not 2-oxoglutarate. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009102 | biotin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.078; coverage=101.392; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009448 | gamma-aminobutyric acid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.078; coverage=101.392; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009821 | alkaloid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.078; coverage=101.392; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.526; coverage=96.421; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.078; coverage=101.392; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004015 | adenosylmethionine-8-amino-7-oxononanoate transaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.078; coverage=101.392; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030170 | pyridoxal phosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.078; coverage=101.392; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034387 | 4-aminobutyrate:pyruvate transaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.078; coverage=101.392; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | dosa:Os04g0614600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=75.776; coverage=96.024; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sly:543873 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.526; coverage=96.421; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |