Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_021292 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:126780068-126781342 (-) |
| Description | Similar to BRO1: Vacuolar-sorting protein BRO1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_021292 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 23 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g15130 |
Class E VPS protein involved in concentration and sorting of cargo proteins of the multivesicular body (MVB) for incorporation into intralumenal vesicles. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0003094 | glomerular filtration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007033 | vacuole organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007165 | signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009653 | anatomical structure morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.276; coverage=70.048; evalue=5.54e-09; UniProt GO evidence=IMP:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019722 | calcium-mediated signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.276; coverage=70.048; evalue=5.54e-09; UniProt GO evidence=IMP:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036257 | multivesicular body organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043328 | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045881 | positive regulation of sporulation resulting in formation of a cellular spore | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.276; coverage=70.048; evalue=5.54e-09; UniProt GO evidence=IMP:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048041 | focal adhesion assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051497 | negative regulation of stress fiber assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097018 | renal albumin absorption | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099638 | endosome to plasma membrane protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120039 | plasma membrane bounded cell projection morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005770 | late endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005771 | multivesicular body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030659 | cytoplasmic vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.276; coverage=70.048; evalue=5.54e-09; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071944 | cell periphery | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043130 | ubiquitin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G15130 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0275451 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.276; coverage=70.048; evalue=5.54e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:14787 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ncr:NCU08001 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.343; coverage=64.734; evalue=4.62e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release |