Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_021051 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:119978801-119981439 (-) |
| Description | Similar to VPS25: Vacuolar protein sorting-associated protein 25 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_021051 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 16 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g19003 |
Component of the ESCRT-II complex (endosomal sorting complex required for transport II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.059; coverage=94.972; evalue=2.39e-35; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007175 | negative regulation of epidermal growth factor-activated receptor activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.059; coverage=94.972; evalue=2.39e-35; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016236 | macroautophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.771; coverage=100.0; evalue=4.11e-109; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036258 | multivesicular body assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.059; coverage=94.972; evalue=2.39e-35; UniProt GO evidence=TAS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043328 | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.771; coverage=100.0; evalue=4.11e-109; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090148 | membrane fission | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.059; coverage=94.972; evalue=2.39e-35; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000814 | ESCRT II complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.771; coverage=100.0; evalue=4.11e-109; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.059; coverage=94.972; evalue=2.39e-35; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.059; coverage=94.972; evalue=2.39e-35; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.771; coverage=100.0; evalue=4.11e-109; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.059; coverage=94.972; evalue=2.39e-35; UniProt GO evidence=HDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.059; coverage=94.972; evalue=2.39e-35; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010008 | endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.059; coverage=94.972; evalue=2.39e-35; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.059; coverage=94.972; evalue=2.39e-35; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005198 | structural molecule activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.771; coverage=100.0; evalue=4.11e-109; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.771; coverage=100.0; evalue=4.11e-109; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G19003 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.771; coverage=100.0; evalue=4.11e-109 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:84313 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.059; coverage=94.972; evalue=2.39e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:28084 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.059; coverage=94.972; evalue=2.39e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:447248 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.412; coverage=94.972; evalue=1.21e-41 | UniProtKB/Swiss-Prot DAT 2026 current_release |