Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_020997`
Query reference	OH1004
Location	Chr04:118270425-118272488 (-)
Description	Similar to ZIP10: Probable zinc transporter 10 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_020997 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 20 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g31260`	Probably mediates zinc uptake from the rhizosphere.	No verified direct reference in this release
`At4g19690`	High-affinity iron transporter that plays a key role in the uptake of iron from the rhizosphere across the plasma membrane in the root epidermal layer.	IRT1, an Arabidopsis transporter essential for iron uptake from the soil and for plant growth.2002 · DOI: 10.1105/tpc.001388
`At5g45105`	Probably mediates zinc uptake from the rhizosphere.	No verified direct reference in this release

Rice

Reference gene ID	Possible function	Papers / DOI
`Os03g0667500`	Iron transporter involved in the uptake of iron from the rhizosphere across the plasma membrane in the root epidermal layer.	Rice plants take up iron as an Fe3+-phytosiderophore and as Fe2+.2006 · DOI: 10.1111/j.1365-313x.2005.02624.x Over-expression of OsIRT1 leads to increased iron and zinc accumulations in rice.2009 · DOI: 10.1111/j.1365-3040.2009.01935.x
`Os03g0667300`	Iron transporter that may play a role in the uptake of iron from the rhizosphere across the plasma membrane in the root epidermal layer.	Rice plants take up iron as an Fe3+-phytosiderophore and as Fe2+.2006 · DOI: 10.1111/j.1365-313x.2005.02624.x

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006826	iron ion transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006828	manganese ion transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006829	zinc ion transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006879	intracellular iron ion homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=IMP:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009617	response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015675	nickel cation transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015691	cadmium ion transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030001	metal ion transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071577	zinc ion transmembrane transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.124; coverage=100.283; evalue=3.41e-149; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005768	endosome	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005769	early endosome	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005773	vacuole	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005802	trans-Golgi network	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.124; coverage=100.283; evalue=3.41e-149; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.124; coverage=100.283; evalue=3.41e-149; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005375	copper ion transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005381	iron ion transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005384	manganese ion transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005385	zinc ion transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.124; coverage=100.283; evalue=3.41e-149; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015086	cadmium ion transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G31260	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.124; coverage=100.283; evalue=3.41e-149	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G19690	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.27; coverage=100.85; evalue=2.56e-138	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os03g0667300	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.213; coverage=95.751; evalue=1.91e-128	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os03g0667500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.678; coverage=96.884; evalue=5.42e-130	UniProtKB/Swiss-Prot DAT 2026 current_release