Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_020102`
Query reference	OH1004
Location	Chr04:51701414-51705737 (+)
Description	Similar to MAX2A: F-box/LRR-repeat MAX2 homolog A (Petunia hybrida OX%3D4102)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_020102 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 20 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g42620`	Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.	ORE9, an F-box protein that regulates leaf senescence in Arabidopsis.2001 · DOI: 10.1105/tpc.010061 MAX1 and MAX2 control shoot lateral branching in Arabidopsis.2002 · DOI: 10.1242/dev.129.5.1131 MAX1 encodes a cytochrome P450 family member that acts downstream of MAX3/4 to produce a carotenoid-derived branch-inhibiting hormone.2005 · DOI: 10.1016/j.devcel.2005.01.009 MAX2 participates in an SCF complex which acts locally at the node to suppress shoot branching.2007 · DOI: 10.1111/j.1365-313x.2007.03032.x Specialisation within the DWARF14 protein family confers distinct responses to karrikins and strigolactones in Arabidopsis.2012 · DOI: 10.1242/dev.074567 Mitogen-activated protein kinase 6 mediates nuclear translocation of ORE3 to promote ORE9 gene expression in methyl jasmonate-induced leaf senescence.2016 · DOI: 10.1093/jxb/erv438

Rice

Reference gene ID	Possible function	Papers / DOI
`Os06g0154200`	Involved in strigolactone (SL) signaling.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006511	ubiquitin-dependent protein catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009414	response to water deprivation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009416	response to light stimulus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009734	auxin-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009926	auxin polar transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009934	regulation of meristem structural organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010016	shoot system morphogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010187	negative regulation of seed germination	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016567	protein ubiquitination	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.655; coverage=76.375; evalue=0.0; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0061137	bud dilation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.133; coverage=78.101; evalue=0.0; UniProt GO evidence=IMP:Gramene	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0160062	cutin-based cuticle development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900057	positive regulation of leaf senescence	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=IMP:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900618	regulation of shoot system morphogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.133; coverage=78.101; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1902584	positive regulation of response to water deprivation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000151	ubiquitin ligase complex	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0; UniProt GO evidence=IPI:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.655; coverage=76.375; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=67.179; coverage=77.238; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0019005	SCF ubiquitin ligase complex	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.655; coverage=76.375; evalue=0.0; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1990756	ubiquitin-like ligase-substrate adaptor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.718; coverage=21.036; evalue=4.57e-09; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G42620	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.626; coverage=75.081; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os06g0154200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.133; coverage=78.101; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release