Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_019750 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:39193003-39193986 (-) |
| Description | Similar to RAB5: Ras-related protein Rab5 (Nicotiana tabacum OX%3D4097) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_019750 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 25 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g19640 |
Endosomal protein that may be involved in endocytosis. | |
At5g45130 |
Involved in the trafficking of soluble cargo proteins from the prevacuolar compartment to the central vacuole. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os12g0631100 |
Plays an important role in intracellular trafficking of seed storage proteins to the protein storage vacuoles (PSVs). |
OsRab5a regulates endomembrane organization and storage protein trafficking in rice endosperm cells.2010 · DOI: 10.1111/j.1365-313x.2010.04370.x The small GTPase Rab5a is essential for intracellular transport of proglutelin from the Golgi apparatus to the protein storage vacuole and endosomal membrane organization in developing rice endosperm.2011 · DOI: 10.1104/pp.111.180505
|
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006886 | intracellular protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.817; coverage=86.508; evalue=6.73e-60; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007033 | vacuole organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.053; coverage=90.476; evalue=1.15e-56; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007034 | vacuolar transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.817; coverage=86.508; evalue=6.73e-60; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010256 | endomembrane system organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=70.796; coverage=89.683; evalue=3.45e-55; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=78.899; coverage=86.508; evalue=5.55e-59; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045324 | late endosome to vacuole transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.053; coverage=90.476; evalue=1.15e-56; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051028 | mRNA transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=70.796; coverage=89.683; evalue=3.45e-55; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=70.796; coverage=89.683; evalue=3.45e-55; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=78.899; coverage=86.508; evalue=5.55e-59; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.817; coverage=86.508; evalue=6.73e-60; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005769 | early endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.053; coverage=90.476; evalue=1.15e-56; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005774 | vacuolar membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.93; coverage=90.476; evalue=1.3e-56; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.053; coverage=90.476; evalue=1.15e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.817; coverage=86.508; evalue=6.73e-60; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009705 | plant-type vacuole membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=70.796; coverage=89.683; evalue=3.45e-55; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010008 | endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.93; coverage=90.476; evalue=1.3e-56; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.817; coverage=86.508; evalue=6.73e-60; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030139 | endocytic vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.817; coverage=86.508; evalue=6.73e-60; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031901 | early endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.053; coverage=90.476; evalue=1.15e-56; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032585 | multivesicular body membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.053; coverage=90.476; evalue=1.15e-56; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032586 | protein storage vacuole membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=70.796; coverage=89.683; evalue=3.45e-55; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003924 | GTPase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.817; coverage=86.508; evalue=6.73e-60; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005525 | GTP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.817; coverage=86.508; evalue=6.73e-60; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036094 | small molecule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.053; coverage=90.476; evalue=1.15e-56; UniProt GO evidence=EXP:DisProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140313 | molecular sequestering activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.053; coverage=90.476; evalue=1.15e-56; UniProt GO evidence=EXP:DisProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G19640 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.053; coverage=90.476; evalue=1.15e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G45130 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.93; coverage=90.476; evalue=1.3e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os12g0631100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=70.796; coverage=89.683; evalue=3.45e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release |