Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_019410 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:30691099-30695815 (-) |
| Description | Similar to EIF6-2: Eukaryotic translation initiation factor 6-2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_019410 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 25 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g55620 |
Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000054 | ribosomal subunit export from nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000460 | maturation of 5.8S rRNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000470 | maturation of LSU-rRNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006110 | regulation of glycolytic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032868 | response to insulin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035195 | miRNA-mediated post-transcriptional gene silencing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035278 | miRNA-mediated gene silencing by inhibition of translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042256 | cytosolic ribosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042304 | regulation of fatty acid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045727 | positive regulation of translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071215 | cellular response to abscisic acid stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902626 | assembly of large subunit precursor of preribosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000377 | regulation of reactive oxygen species metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005638 | lamin filament | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005882 | intermediate filament | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=76.132; coverage=76.656; evalue=1.33e-136; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003743 | translation initiation factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043022 | ribosome binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043023 | ribosomal large subunit binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G55620 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.429; coverage=77.287; evalue=3.56e-170 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:286811 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=75.72; coverage=76.656; evalue=1.63e-135 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:3692 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=76.132; coverage=76.656; evalue=1.33e-136 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:16418 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.72; coverage=76.656; evalue=5.37e-137 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:305506 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.309; coverage=76.656; evalue=4.03e-136 | UniProtKB/Swiss-Prot DAT 2026 current_release |