RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDLXL04_019312
Query referenceOH1004
LocationChr04:28681887-28690331 (-)
DescriptionSimilar to SNL6: Cinnamoyl-CoA reductase-like SNL6 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_019312 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 16 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g35420 Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine).
An anther-specific dihydroflavonol 4-reductase-like gene (DRL1) is essential for male fertility in Arabidopsis.2009 · DOI: 10.1111/j.1469-8137.2008.02692.x
Analysis of TETRAKETIDE α-PYRONE REDUCTASE function in Arabidopsis thaliana reveals a previously unknown, but conserved, biochemical pathway in sporopollenin monomer biosynthesis.2010 · DOI: 10.1105/tpc.110.080036

Rice

Reference gene IDPossible functionPapers / DOI
Os01g0639200 Involved in defense response.
Rice Snl6, a cinnamoyl-CoA reductase-like gene family member, is required for NH1-mediated immunity to Xanthomonas oryzae pv. oryzae.2010 · DOI: 10.1371/journal.pgen.1001123

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006694steroid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.715; coverage=97.785; evalue=1.45e-44; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007623circadian rhythmBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.177; coverage=100.0; evalue=1.05e-41; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009555pollen developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.566; coverage=96.203; evalue=2.7e-35; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009699phenylpropanoid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.177; coverage=100.0; evalue=1.05e-41; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009809lignin biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.715; coverage=97.785; evalue=1.45e-44; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010584pollen exine formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.566; coverage=96.203; evalue=2.7e-35; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010597green leaf volatile biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.177; coverage=100.0; evalue=1.05e-41; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042742defense response to bacteriumBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.715; coverage=97.785; evalue=1.45e-44; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048316seed developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.566; coverage=96.203; evalue=2.7e-35; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080110sporopollenin biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.566; coverage=96.203; evalue=2.7e-35; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.566; coverage=96.203; evalue=2.7e-35; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.177; coverage=100.0; evalue=1.05e-41; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.566; coverage=96.203; evalue=2.7e-35; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000166nucleotide bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.177; coverage=100.0; evalue=1.05e-41; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.715; coverage=97.785; evalue=1.45e-44; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016621cinnamoyl-CoA reductase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.177; coverage=100.0; evalue=1.05e-41; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G35420KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.566; coverage=96.203; evalue=2.7e-35UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os01g0639200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.715; coverage=97.785; evalue=1.45e-44UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmtr:25487973KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.548; coverage=98.101; evalue=2.58e-37UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4326581KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.715; coverage=97.785; evalue=1.45e-44UniProtKB/Swiss-Prot DAT 2026 current_release