Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_019264 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:27559899-27560961 (+) |
| Description | Similar to PCAP1: Plasma membrane-associated cation-binding protein 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_019264 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 33 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g20260 |
May be involved in intracellular signaling through interaction with PtdInsPs and calmodulin (CaM); may keep PtdInsPs attached to the plasma membrane until Ca(2+)-CaM reaches a competitive concentration subsequent to an increase triggered by a stimulus, thus leading to PtdInsPs release and subsequent activation of InsPs-dependent signaling cascade. |
Molecular properties of a novel, hydrophilic cation-binding protein associated with the plasma membrane.2007 · DOI: 10.1093/jxb/erl284 A hydrophilic cation-binding protein of Arabidopsis thaliana, AtPCaP1, is localized to plasma membrane via N-myristoylation and interacts with calmodulin and the phosphatidylinositol phosphates PtdIns(3,4,5)P(3) and PtdIns(3,5)P(2).2008 · DOI: 10.1111/j.1742-4658.2008.06379.x
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os01g0233000 |
Salt stress root protein RS1. | No verified direct reference in this release |
UniProt: A2WMG6 |
Salt stress root protein RS1. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006499 | N-terminal protein myristoylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010350 | cellular response to magnesium starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031115 | negative regulation of microtubule polymerization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031117 | positive regulation of microtubule depolymerization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035865 | cellular response to potassium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043622 | cortical microtubule organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051511 | negative regulation of unidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051592 | response to calcium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071219 | cellular response to molecule of bacterial origin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071280 | cellular response to copper ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071281 | cellular response to iron ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071286 | cellular response to magnesium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071325 | cellular response to mannitol stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071472 | cellular response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072709 | cellular response to sorbitol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0075733 | intracellular transport of virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090332 | stomatal closure | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005881 | cytoplasmic microtubule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043657 | host cell | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IEA:GOC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005507 | copper ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005509 | calcium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005516 | calmodulin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005547 | phosphatidylinositol-3,4,5-trisphosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008017 | microtubule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043325 | phosphatidylinositol-3,4-bisphosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080025 | phosphatidylinositol-3,5-bisphosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G20260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.143; coverage=90.099; evalue=3.62e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0233000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.656; coverage=63.366; evalue=1.12e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release |