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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_019229
Query referenceOH1004
LocationChr04:26849630-26855978 (-)
DescriptionSimilar to SCAR2: Protein SCAR2 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_019229 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 15 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g38440 Involved in regulation of actin and microtubule organization.
DISTORTED3/SCAR2 is a putative arabidopsis WAVE complex subunit that activates the Arp2/3 complex and is required for epidermal morphogenesis.2005 · DOI: 10.1105/tpc.104.027987
IRREGULAR TRICHOME BRANCH1 in Arabidopsis encodes a plant homolog of the actin-related protein2/3 complex activator Scar/WAVE that regulates actin and microtubule organization.2005 · DOI: 10.1105/tpc.104.028670
At5g01730 Involved in regulation of actin and microtubule organization. No verified direct reference in this release
At1g29170 Involved in regulation of actin and microtubule organization. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: Q84TX2 Involved in regulation of actin and microtubule organization. No verified direct reference in this release
Os01g0208600 Involved in regulation of actin and microtubule organization. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0010090trichome morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010091trichome branchingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030036actin cytoskeleton organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045010actin nucleationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051127positive regulation of actin nucleationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0098609cell-cell adhesionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000601positive regulation of Arp2/3 complex-mediated actin nucleationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005856cytoskeletonCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.435; coverage=25.265; evalue=1.11e-80; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010287plastoglobuleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.435; coverage=25.265; evalue=1.11e-80; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031209SCAR complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003779actin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034237protein kinase A regulatory subunit bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071933Arp2/3 complex bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G38440KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.762; coverage=38.959; evalue=3.03e-104UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G01730KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.435; coverage=25.265; evalue=1.11e-80UniProtKB/Swiss-Prot DAT 2026 current_release