Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_019018 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:22112638-22115709 (+) |
| Description | Similar to CKL3: Casein kinase 1-like protein 3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_019018 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 22 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g28880 |
Protein kinase involved in blue light responses (e.g. hypocotyl elongation and flowering) by phosphorylating CRY2 to reduce its stability. | No verified direct reference in this release |
At4g28860 |
Protein kinase involved in blue light responses (e.g. hypocotyl elongation and flowering) by phosphorylating CRY2 to reduce its stability. | No verified direct reference in this release |
At5g57015 |
Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. | No verified direct reference in this release |
At4g26100 |
Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. | No verified direct reference in this release |
At4g28540 |
Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001558 | regulation of cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.136; coverage=72.912; evalue=2.8e-176; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006897 | endocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.151; coverage=83.973; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007165 | signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.151; coverage=83.973; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009637 | response to blue light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.151; coverage=83.973; evalue=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009640 | photomorphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.151; coverage=83.973; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009785 | blue light signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.151; coverage=83.973; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043622 | cortical microtubule organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.136; coverage=72.912; evalue=2.8e-176; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046777 | protein autophosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.534; coverage=82.393; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051510 | regulation of unidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.136; coverage=72.912; evalue=2.8e-176; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.151; coverage=83.973; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.151; coverage=83.973; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.151; coverage=83.973; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005856 | cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.136; coverage=72.912; evalue=2.8e-176; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=73.502; coverage=71.558; evalue=5.38e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.136; coverage=72.912; evalue=2.8e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030054 | cell junction | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.136; coverage=72.912; evalue=2.8e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055028 | cortical microtubule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.136; coverage=72.912; evalue=2.8e-176; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071944 | cell periphery | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.136; coverage=72.912; evalue=2.8e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.151; coverage=83.973; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.151; coverage=83.973; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015631 | tubulin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.136; coverage=72.912; evalue=2.8e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.151; coverage=83.973; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G26100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=73.502; coverage=71.558; evalue=5.38e-178 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G28540 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.136; coverage=72.912; evalue=2.8e-176 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G28860 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.534; coverage=82.393; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G28880 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.151; coverage=83.973; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G57015 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=75.394; coverage=71.558; evalue=7.52e-180 | UniProtKB/Swiss-Prot DAT 2026 current_release |