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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_018745
Query referenceOH1004
LocationChr04:17518617-17521624 (+)
DescriptionSimilar to RUS2: Protein root UVB sensitive 2%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_018745 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 8 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g31190 Involved in a root UV-B sensing pathway and in the protection against the hypersensitivity to very low-fluence-rate (VLF) UV-B.
ROOT UV-B SENSITIVE2 acts with ROOT UV-B SENSITIVE1 in a root ultraviolet B-sensing pathway.2009 · DOI: 10.1104/pp.109.139253
Arabidopsis ROOT UVB SENSITIVE2/WEAK AUXIN RESPONSE1 is required for polar auxin transport.2010 · DOI: 10.1105/tpc.110.074195
At5g49820 Required for normal embryo development. No verified direct reference in this release
At3g45890 Involved in a root UV-B sensing pathway and in the protection against the hypersensitivity to very low-fluence-rate (VLF) UV-B.
Role of root UV-B sensing in Arabidopsis early seedling development.2008 · DOI: 10.1073/pnas.0809942106
ROOT UV-B SENSITIVE2 acts with ROOT UV-B SENSITIVE1 in a root ultraviolet B-sensing pathway.2009 · DOI: 10.1104/pp.109.139253
ROOT ULTRAVIOLET B-SENSITIVE1/weak auxin response3 is essential for polar auxin transport in Arabidopsis.2013 · DOI: 10.1104/pp.113.217018

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009926auxin polar transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.735; coverage=97.647; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010224response to UV-BBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.735; coverage=97.647; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032502developmental processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.246; coverage=81.176; evalue=5.7e-35; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.651; coverage=74.118; evalue=1.67e-42; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.735; coverage=97.647; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009941chloroplast envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.735; coverage=97.647; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.822; coverage=89.647; evalue=5.06e-33; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031969chloroplast membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.246; coverage=81.176; evalue=5.7e-35; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G31190KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.735; coverage=97.647; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G45890KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.246; coverage=81.176; evalue=5.7e-35UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G49820KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.651; coverage=74.118; evalue=1.67e-42UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:233913KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.822; coverage=89.647; evalue=5.06e-33UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGrno:361654KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.649; coverage=89.176; evalue=7.91e-33UniProtKB/Swiss-Prot DAT 2026 current_release