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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_017973
Query referenceOH1004
LocationChr04:4450029-4451359 (+)
DescriptionSimilar to PIRL6: Plant intracellular Ras-group-related LRR protein 6 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_017973 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 6 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g19330 Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction. No verified direct reference in this release
At4g26050 Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction. No verified direct reference in this release
At4g29880 Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction. No verified direct reference in this release
At3g11330 Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction.
PIRL1 and PIRL9, encoding members of a novel plant-specific family of leucine-rich repeat proteins, are essential for differentiation of microspores into pollen.2010 · DOI: 10.1007/s00425-010-1242-6
Effect of sporophytic PIRL9 genotype on post-meiotic expression of the Arabidopsis pirl1;pirl9 mutant pollen phenotype.2011 · DOI: 10.1007/s00425-010-1324-5

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0605300 Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009555pollen developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.394; coverage=68.767; evalue=1.39e-65; UniProt GO evidence=IGI:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035556intracellular signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.652; coverage=87.397; evalue=1.21e-151; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0055046microgametogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.394; coverage=68.767; evalue=1.39e-65; UniProt GO evidence=IGI:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.652; coverage=87.397; evalue=1.21e-151; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.394; coverage=68.767; evalue=1.39e-65; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.394; coverage=68.767; evalue=1.39e-65; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G19330KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.652; coverage=87.397; evalue=1.21e-151UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G11330KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.394; coverage=68.767; evalue=1.39e-65UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G26050KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.464; coverage=95.616; evalue=7.87e-140UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G29880KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=63.636; coverage=87.397; evalue=4.02e-131UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0605300KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.654; coverage=88.767; evalue=1.86e-137UniProtKB/Swiss-Prot DAT 2026 current_release