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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_017662
Query referenceOH1004
LocationChr03:156207087-156212033 (-)
DescriptionSimilar to NSP5: Nitrile-specifier protein 5 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_017662 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 18 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g48180 Specifier protein that contributes to constitutive and herbivore-induced simple nitrile formation.
Characterization of recombinant nitrile-specifier proteins (NSPs) of Arabidopsis thaliana: dependency on Fe(II) ions and the effect of glucosinolate substrate and reaction conditions.2012 · DOI: 10.1016/j.phytochem.2012.08.004
At3g16400 Specifier protein responsible for constitutive and herbivore-induced simple nitrile formation, especially in seedlings and roots. No verified direct reference in this release
At3g16410 Specifier protein that contributes to constitutive and herbivore-induced simple nitrile formation. No verified direct reference in this release
At3g16390 Specifier protein responsible for constitutive and herbivore-induced simple nitrile formation, especially in roots. No verified direct reference in this release
At2g33070 Specifier protein responsible for constitutive and herbivore-induced simple nitrile formation, especially in seeds.
Nitrile-specifier proteins involved in glucosinolate hydrolysis in Arabidopsis thaliana.2009 · DOI: 10.1074/jbc.m807500200
Characterization of recombinant nitrile-specifier proteins (NSPs) of Arabidopsis thaliana: dependency on Fe(II) ions and the effect of glucosinolate substrate and reaction conditions.2012 · DOI: 10.1016/j.phytochem.2012.08.004
NSP-Dependent Simple Nitrile Formation Dominates upon Breakdown of Major Aliphatic Glucosinolates in Roots, Seeds, and Seedlings of Arabidopsis thaliana Columbia-0.2016 · DOI: 10.3389/fpls.2016.01821
Glucosinolate Content in Dormant and Germinating Arabidopsis thaliana Seeds Is Affected by Non-Functional Alleles of Classical Myrosinase and Nitrile-Specifier Protein Genes.2019 · DOI: 10.3389/fpls.2019.01549

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009793embryo development ending in seed dormancyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.673; coverage=72.17; evalue=4.05e-96; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009845seed germinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.443; coverage=72.406; evalue=6.21e-106; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010162seed dormancy processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.443; coverage=72.406; evalue=6.21e-106; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019762glucosinolate catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.194; coverage=73.113; evalue=2.37e-111; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080027response to herbivoreBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.443; coverage=72.406; evalue=6.21e-106; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080028nitrile biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.194; coverage=73.113; evalue=2.37e-111; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.194; coverage=73.113; evalue=2.37e-111; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.194; coverage=73.113; evalue=2.37e-111; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.673; coverage=72.17; evalue=4.05e-96; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.194; coverage=73.113; evalue=2.37e-111; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.623; coverage=72.642; evalue=4.07e-102; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=49.346; coverage=72.17; evalue=2.67e-96; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.194; coverage=73.113; evalue=2.37e-111; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.443; coverage=72.406; evalue=6.21e-106; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016829lyase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.194; coverage=73.113; evalue=2.37e-111; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030234enzyme regulator activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.194; coverage=73.113; evalue=2.37e-111; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030246carbohydrate bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.443; coverage=72.406; evalue=6.21e-106; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.194; coverage=73.113; evalue=2.37e-111; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G33070KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.673; coverage=72.17; evalue=4.05e-96UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G16390KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=49.346; coverage=72.17; evalue=2.67e-96UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G16400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.443; coverage=72.406; evalue=6.21e-106UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G16410KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.623; coverage=72.642; evalue=4.07e-102UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G48180KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.194; coverage=73.113; evalue=2.37e-111UniProtKB/Swiss-Prot DAT 2026 current_release