Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_016877 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:135930375-135932425 (-) |
| Description | Similar to NDC80: Kinetochore protein NDC80 homolog (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_016877 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 33 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g54630 |
Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity to ensure proper cell division. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000070 | mitotic sister chromatid segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.185; coverage=93.264; evalue=4.24e-14; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000132 | establishment of mitotic spindle orientation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000278 | mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.185; coverage=93.264; evalue=4.24e-14; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007052 | mitotic spindle organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007057 | spindle assembly involved in female meiosis I | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.185; coverage=93.264; evalue=4.24e-14; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007059 | chromosome segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007094 | mitotic spindle assembly checkpoint signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.185; coverage=93.264; evalue=4.24e-14; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008315 | G2/MI transition of meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.185; coverage=93.264; evalue=4.24e-14; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008608 | attachment of spindle microtubules to kinetochore | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.014; coverage=84.801; evalue=2.66e-16; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051298 | centrosome duplication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.185; coverage=93.264; evalue=4.24e-14; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.301; coverage=93.092; evalue=2.68e-139; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051310 | metaphase chromosome alignment | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051315 | attachment of mitotic spindle microtubules to kinetochore | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051455 | spindle attachment to meiosis I kinetochore | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.014; coverage=84.801; evalue=2.66e-16; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090267 | positive regulation of mitotic cell cycle spindle assembly checkpoint | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990571 | meiotic centromere clustering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.014; coverage=84.801; evalue=2.66e-16; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990758 | mitotic sister chromatid biorientation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.014; coverage=84.801; evalue=2.66e-16; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000775 | chromosome, centromeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.014; coverage=84.801; evalue=2.66e-16; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000776 | kinetochore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000779 | condensed chromosome, centromeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.014; coverage=84.801; evalue=2.66e-16; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000940 | outer kinetochore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.014; coverage=84.801; evalue=2.66e-16; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.301; coverage=93.092; evalue=2.68e-139; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.185; coverage=93.264; evalue=4.24e-14; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005813 | centrosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.185; coverage=93.264; evalue=4.24e-14; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.185; coverage=93.264; evalue=4.24e-14; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031262 | Ndc80 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.301; coverage=93.092; evalue=2.68e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008017 | microtubule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.301; coverage=93.092; evalue=2.68e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030332 | cyclin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140483 | kinetochore adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G54630 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.301; coverage=93.092; evalue=2.68e-139 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:395134 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.471; coverage=86.874; evalue=7.95e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10403 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.185; coverage=93.264; evalue=4.24e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2540097 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.014; coverage=84.801; evalue=2.66e-16 | UniProtKB/Swiss-Prot DAT 2026 current_release |