Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_016554`
Query reference	OH1004
Location	Chr03:126880900-126883800 (+)
Description	Similar to At5g53970: Probable aminotransferase TAT2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_016554 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 18 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g53970`	Probable aminotransferase TAT2.	No verified direct reference in this release
`At5g36160`	Transaminase involved in tyrosine breakdown.	Identification and Partial Characterization of an L-Tyrosine Aminotransferase (TAT) from Arabidopsis thaliana.2010 · DOI: 10.1155/2010/549572
`At2g20610`	C-S lyase involved in glucosinolate biosynthesis.	Arabidopsis mutants in the C-S lyase of glucosinolate biosynthesis establish a critical role for indole-3-acetaldoxime in auxin homeostasis.2004 · DOI: 10.1111/j.1365-313x.2004.02002.x

Rice

Reference gene ID	Possible function	Papers / DOI
`Os02g0306401`	Involved in biosynthesis of mugineic acid family phytosiderophores, which are ferric iron chelators produced in graminaceous plants in response to iron deficiency.	Identification and localisation of the rice nicotianamine aminotransferase gene OsNAAT1 expression suggests the site of phytosiderophore synthesis in rice.2008 · DOI: 10.1007/s11103-007-9262-8

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0001560	regulation of cell growth by extracellular stimulus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.875; coverage=97.317; evalue=1.64e-156; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006520	amino acid metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=53.75; coverage=97.561; evalue=4.04e-160; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006559	L-phenylalanine catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=53.75; coverage=97.561; evalue=4.04e-160; UniProt GO evidence=IEA:UniProtKB-UniPathway	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006572	L-tyrosine catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.828; coverage=97.805; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009684	indoleacetic acid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.875; coverage=97.317; evalue=1.64e-156; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010189	vitamin E biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.828; coverage=97.805; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0019761	glucosinolate biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.875; coverage=97.317; evalue=1.64e-156; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048830	adventitious root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.875; coverage=97.317; evalue=1.64e-156; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050832	defense response to fungus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.875; coverage=97.317; evalue=1.64e-156; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.828; coverage=97.805; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.875; coverage=97.317; evalue=1.64e-156; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.828; coverage=97.805; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009536	plastid	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=53.75; coverage=97.561; evalue=4.04e-160; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004838	L-tyrosine-2-oxoglutarate transaminase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.828; coverage=97.805; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016846	carbon-sulfur lyase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.875; coverage=97.317; evalue=1.64e-156; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030170	pyridoxal phosphate binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.828; coverage=97.805; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0033855	nicotianamine aminotransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.252; coverage=95.854; evalue=3.32e-161; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080108	S-alkylthiohydroximate lyase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.875; coverage=97.317; evalue=1.64e-156; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G20610	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.875; coverage=97.317; evalue=1.64e-156	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G36160	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=53.75; coverage=97.561; evalue=4.04e-160	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G53970	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.828; coverage=97.805; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os02g0306401	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.252; coverage=95.854; evalue=3.32e-161	UniProtKB/Swiss-Prot DAT 2026 current_release