Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_016317 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:118681289-118682702 (+) |
| Description | Similar to RIDA: Reactive Intermediate Deaminase A%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_016317 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 35 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g20390 |
Hydrolyzes the Ser-derived enamine/imine product of Thr dehydratase, protecting the plastidial branched-chain aminotransferase BCAT3 (AC Q9M401) from inactivation. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006402 | mRNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006629 | lipid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.419; coverage=64.583; evalue=1.09e-43; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009082 | branched-chain amino acid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009097 | isoleucine biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009636 | response to toxic substance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017148 | negative regulation of translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019518 | L-threonine catabolic process to glycine | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.419; coverage=64.583; evalue=1.09e-43; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033993 | response to lipid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=53.226; coverage=64.583; evalue=6.24e-42; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050680 | negative regulation of epithelial cell proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.226; coverage=64.583; evalue=1.78e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061157 | mRNA destabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.419; coverage=64.583; evalue=1.09e-43; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070314 | G1 to G0 transition | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=53.226; coverage=64.583; evalue=6.24e-42; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902074 | response to salt | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=53.226; coverage=64.583; evalue=6.24e-42; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.419; coverage=64.583; evalue=1.09e-43; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005759 | mitochondrial matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.419; coverage=64.583; evalue=1.09e-43; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005777 | peroxisome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.419; coverage=64.583; evalue=1.09e-43; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009579 | thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.419; coverage=64.583; evalue=1.09e-43; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.419; coverage=64.583; evalue=1.09e-43; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.419; coverage=64.583; evalue=1.09e-43; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016892 | RNA endonuclease activity producing 3'-phosphomonoesters, hydrolytic mechanism | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.419; coverage=64.583; evalue=1.09e-43; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019239 | deaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036041 | long-chain fatty acid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.226; coverage=64.583; evalue=1.78e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.226; coverage=64.583; evalue=1.78e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043169 | cation binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.226; coverage=64.583; evalue=1.78e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046914 | transition metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.226; coverage=64.583; evalue=1.78e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120242 | 2-iminobutanoate deaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120243 | 2-iminopropanoate deaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G20390 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.692; coverage=101.562; evalue=1.57e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cel:CELE_C23G10.2 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=55.652; coverage=59.896; evalue=1.98e-41 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10247 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.419; coverage=64.583; evalue=1.09e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:15473 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.226; coverage=64.583; evalue=1.78e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:65151 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=53.226; coverage=64.583; evalue=6.24e-42 | UniProtKB/Swiss-Prot DAT 2026 current_release |