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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_015908
Query referenceOH1004
LocationChr03:97474342-97475767 (+)
DescriptionSimilar to ASK4: Shaggy-related protein kinase delta (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_015908 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 33 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g57870 May mediate extracellular signals to regulate transcription in differentiating cells. No verified direct reference in this release
At1g09840 May mediate extracellular signals to regulate transcription in differentiating cells. No verified direct reference in this release
At4g18710 Negative regulator in brassinosteroid signal transduction pathway important for plant growth.
Regulation of brassinosteroid signaling by a GSK3/SHAGGY-like kinase.2002 · DOI: 10.1126/science.1065769
The GSK3-like kinase BIN2 phosphorylates and destabilizes BZR1, a positive regulator of the brassinosteroid signaling pathway in Arabidopsis.2002 · DOI: 10.1073/pnas.152342599
Two putative BIN2 substrates are nuclear components of brassinosteroid signaling.2002 · DOI: 10.1104/pp.102.010918
Brassinosteroid regulates stomatal development by GSK3-mediated inhibition of a MAPK pathway.2012 · DOI: 10.1038/nature10794
SPEECHLESS integrates brassinosteroid and stomata signalling pathways.2012 · DOI: 10.1038/ncb2471
Brassinosteroid-regulated GSK3/Shaggy-like kinases phosphorylate mitogen-activated protein (MAP) kinase kinases, which control stomata development in Arabidopsis thaliana.2013 · DOI: 10.1074/jbc.m112.384453
BSKs are partially redundant positive regulators of brassinosteroid signaling in Arabidopsis.2013 · DOI: 10.1111/tpj.12175
POLAR-guided signalling complex assembly and localization drive asymmetric cell division.2018 · DOI: 10.1038/s41586-018-0714-x
At4g00720 May mediate extracellular signals to regulate transcription in differentiating cells. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006468protein phosphorylationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006972hyperosmotic responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.0; coverage=23.952; evalue=1.29e-15; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007033vacuole organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007165signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.0; coverage=23.952; evalue=1.29e-15; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009414response to water deprivationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009416response to light stimulusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009553embryo sac developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009651response to salt stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.0; coverage=23.952; evalue=1.29e-15; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009729detection of brassinosteroid stimulusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009733response to auxinBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009741response to brassinosteroidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.81; coverage=25.15; evalue=5.05e-13; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009742brassinosteroid mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009825multidimensional cell growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009965leaf morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010082regulation of root meristem growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010508positive regulation of autophagyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030154cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.0; coverage=23.952; evalue=1.29e-15; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046777protein autophosphorylationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046827positive regulation of protein export from nucleusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048765root hair cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1900458negative regulation of brassinosteroid mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.0; coverage=23.952; evalue=1.29e-15; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.0; coverage=23.952; evalue=1.29e-15; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.5; coverage=23.952; evalue=2.72e-15; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005938cell cortexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031982vesicleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004672protein kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004674protein serine/threonine kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.0; coverage=23.952; evalue=1.29e-15; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.0; coverage=23.952; evalue=1.29e-15; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016301kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.81; coverage=25.15; evalue=5.05e-13; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042802identical protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13; UniProt GO evidence=IPI:IntActUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0106310protein serine kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.0; coverage=23.952; evalue=1.29e-15; UniProt GO evidence=IEA:RHEAUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G09840KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.5; coverage=23.952; evalue=2.72e-15UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G57870KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.0; coverage=23.952; evalue=1.29e-15UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G00720KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.81; coverage=25.15; evalue=5.05e-13UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G18710KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.429; coverage=25.15; evalue=4.62e-13UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbna:106388722KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.81; coverage=25.15; evalue=4.49e-13UniProtKB/Swiss-Prot DAT 2026 current_release