Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_014979 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:60775338-60776414 (-) |
| Description | Similar to RIC4: CRIB domain-containing protein RIC4 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_014979 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 11 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g16490 |
Functions as a downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. |
A genome-wide analysis of Arabidopsis Rop-interactive CRIB motif-containing proteins that act as Rop GTPase targets.2001 · DOI: 10.1105/tpc.010218 Arabidopsis interdigitating cell growth requires two antagonistic pathways with opposing action on cell morphogenesis.2005 · DOI: 10.1016/j.cell.2004.12.026
|
At4g28556 |
Functions as a downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. | No verified direct reference in this release |
At4g04900 |
Functions as a downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. | |
At1g03982 |
Functions as a downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. | No verified direct reference in this release |
At2g20430 |
Functions as a downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009416 | response to light stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.0; coverage=26.042; evalue=1.43e-08; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009860 | pollen tube growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.857; coverage=72.917; evalue=1.04e-19; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010215 | cellulose microfibril organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.857; coverage=72.917; evalue=1.04e-19; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017157 | regulation of exocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.857; coverage=72.917; evalue=1.04e-19; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030833 | regulation of actin filament polymerization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.857; coverage=72.917; evalue=1.04e-19; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051650 | establishment of vesicle localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.857; coverage=72.917; evalue=1.04e-19; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.0; coverage=26.042; evalue=1.43e-08; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.0; coverage=26.042; evalue=1.43e-08; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.857; coverage=72.917; evalue=1.04e-19; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.857; coverage=72.917; evalue=1.04e-19; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016324 | apical plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.857; coverage=72.917; evalue=1.04e-19; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G03982 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.372; coverage=44.792; evalue=8.41e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G20430 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.0; coverage=26.042; evalue=1.08e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G04900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.17; coverage=27.604; evalue=5.89e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G28556 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.0; coverage=26.042; evalue=1.43e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G16490 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.857; coverage=72.917; evalue=1.04e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release |