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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_014496
Query referenceOH1004
LocationChr03:50579837-50583610 (-)
DescriptionSimilar to MSP1: Leucine-rich repeat receptor protein kinase MSP1 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_014496 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 29 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g07280 Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. No verified direct reference in this release
At4g20140 Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons.
GASSHO1 and GASSHO2 encoding a putative leucine-rich repeat transmembrane-type receptor kinase are essential for the normal development of the epidermal surface in Arabidopsis embryos.2008 · DOI: 10.1111/j.1365-313x.2007.03395.x
The receptor-like kinases GSO1 and GSO2 together regulate root growth in Arabidopsis through control of cell division and cell fate specification.2014 · DOI: 10.1002/dvdy.24066
A peptide hormone required for Casparian strip diffusion barrier formation in Arabidopsis roots.2017 · DOI: 10.1126/science.aai9057
At1g55610 Receptor with a serine/threonine-protein kinase activity.
BRL1, a leucine-rich repeat receptor-like protein kinase, is functionally redundant with BRI1 in regulating Arabidopsis brassinosteroid signaling.2004 · DOI: 10.1111/j.1365-313x.2004.02214.x
BRL1 and BRL3 are novel brassinosteroid receptors that function in vascular differentiation in Arabidopsis.2004 · DOI: 10.1242/dev.01403

Rice

Reference gene IDPossible functionPapers / DOI
Os01g0917500 Receptor-like kinase that plays important roles in restricting the number of cells entering into male and female sporogenesis.
The MSP1 gene is necessary to restrict the number of cells entering into male and female sporogenesis and to initiate anther wall formation in rice.2003 · DOI: 10.1105/tpc.012401
Os02g0194400 Receptor-like kinase that may play a role male and female sporogenesis. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009414response to water deprivationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.799; coverage=85.044; evalue=7.74e-167; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009416response to light stimulusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.799; coverage=85.044; evalue=7.74e-167; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009554megasporogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.726; coverage=102.148; evalue=0.0; UniProt GO evidence=IMP:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009556microsporogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.726; coverage=102.148; evalue=0.0; UniProt GO evidence=IMP:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009611response to woundingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.222; coverage=100.239; evalue=5.99e-176; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009729detection of brassinosteroid stimulusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.799; coverage=85.044; evalue=7.74e-167; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009742brassinosteroid mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.799; coverage=85.044; evalue=7.74e-167; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009755hormone-mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.799; coverage=85.044; evalue=7.74e-167; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009791post-embryonic developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.799; coverage=85.044; evalue=7.74e-167; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010234anther wall tapetum cell fate specificationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.943; coverage=90.453; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042659regulation of cell fate specificationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.222; coverage=100.239; evalue=5.99e-176; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045184establishment of protein localizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.222; coverage=100.239; evalue=5.99e-176; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046777protein autophosphorylationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.943; coverage=90.453; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048658anther wall tapetum developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.726; coverage=102.148; evalue=0.0; UniProt GO evidence=IMP:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051302regulation of cell divisionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.222; coverage=100.239; evalue=5.99e-176; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0055075potassium ion homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.222; coverage=100.239; evalue=5.99e-176; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090708specification of plant organ axis polarityBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.222; coverage=100.239; evalue=5.99e-176; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0160073Casparian strip assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.222; coverage=100.239; evalue=5.99e-176; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000067regulation of root morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.222; coverage=100.239; evalue=5.99e-176; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000280regulation of root developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.222; coverage=100.239; evalue=5.99e-176; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.726; coverage=102.148; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.726; coverage=102.148; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048226Casparian stripCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.222; coverage=100.239; evalue=5.99e-176; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004674protein serine/threonine kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.726; coverage=102.148; evalue=0.0; UniProt GO evidence=ISS:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005496steroid bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.799; coverage=85.044; evalue=7.74e-167; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.726; coverage=102.148; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019199transmembrane receptor protein kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.943; coverage=90.453; evalue=0.0; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0038023signaling receptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.799; coverage=85.044; evalue=7.74e-167; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0106310protein serine kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.726; coverage=102.148; evalue=0.0; UniProt GO evidence=IEA:RHEAUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G55610KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.799; coverage=85.044; evalue=7.74e-167UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G20140KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.222; coverage=100.239; evalue=5.99e-176UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G07280KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.943; coverage=90.453; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os01g0917500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.726; coverage=102.148; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os02g0194400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.065; coverage=103.978; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4324355KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.726; coverage=102.148; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release