Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_014159 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:43047237-43049361 (+) |
| Description | |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_014159 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 53 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g05210 |
Seems to be involved in nucleotide excision repair (NER) of damaged DNA (dark repair mechanism). |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000720 | pyrimidine dimer repair by nucleotide-excision repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000723 | telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.148; coverage=66.575; evalue=2.75e-81; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006289 | nucleotide-excision repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006294 | nucleotide-excision repair, preincision complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006303 | double-strand break repair via nonhomologous end joining | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006312 | mitotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006949 | syncytium formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006979 | response to oxidative stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007281 | germ cell development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007283 | spermatogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008283 | cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008340 | determination of adult lifespan | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009650 | UV protection | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010165 | response to X-ray | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010213 | non-photoreactive DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010224 | response to UV-B | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010332 | response to gamma radiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032205 | negative regulation of telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035264 | multicellular organism growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036297 | interstrand cross-link repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045002 | double-strand break repair via single-strand annealing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.128; coverage=53.425; evalue=1.09e-57; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048009 | insulin-like growth factor receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048468 | cell development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051276 | chromosome organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060261 | positive regulation of transcription initiation by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061819 | telomeric DNA-containing double minutes formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070914 | UV-damage excision repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090656 | t-circle formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904431 | positive regulation of t-circle formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905765 | negative regulation of protection from non-homologous end joining at telomere | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000109 | nucleotide-excision repair complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000110 | nucleotide-excision repair factor 1 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.128; coverage=53.425; evalue=1.09e-57; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035861 | site of double-strand break | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.128; coverage=53.425; evalue=1.09e-57; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070522 | ERCC4-ERCC1 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001094 | TFIID-class transcription factor complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003684 | damaged DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003697 | single-stranded DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004519 | endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.128; coverage=53.425; evalue=1.09e-57; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.128; coverage=53.425; evalue=1.09e-57; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017108 | 5'-flap endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031593 | polyubiquitin modification-dependent protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.128; coverage=53.425; evalue=1.09e-57; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990599 | 3' overhang single-stranded DNA endodeoxyribonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990841 | promoter-specific chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G05210 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.946; coverage=100.822; evalue=4.23e-157 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:615637 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.148; coverage=66.575; evalue=2.75e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:2067 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.877; coverage=62.466; evalue=1.07e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:13870 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.215; coverage=63.836; evalue=1.58e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2540887 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.128; coverage=53.425; evalue=1.09e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release |