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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_013957
Query referenceOH1004
LocationChr03:39086048-39087658 (-)
DescriptionSimilar to EXPA13: Expansin-A13 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_013957 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 6 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g03220 Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No verified direct reference in this release
At3g55500 Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No verified direct reference in this release
At5g56320 Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans.
LBD18 acts as a transcriptional activator that directly binds to the EXPANSIN14 promoter in promoting lateral root emergence of Arabidopsis.2013 · DOI: 10.1111/tpj.12013

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0583500 May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No verified direct reference in this release
Os01g0823100 May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006949syncytium formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.205; coverage=84.502; evalue=9.68e-92; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009826unidimensional cell growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.444; coverage=83.026; evalue=2.09e-140; UniProt GO evidence=NAS:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009828plant-type cell wall looseningBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.444; coverage=83.026; evalue=2.09e-140; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010311lateral root formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.828; coverage=83.764; evalue=6.88e-91; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005576extracellular regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.444; coverage=83.026; evalue=2.09e-140; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.444; coverage=83.026; evalue=2.09e-140; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G03220KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.444; coverage=83.026; evalue=2.09e-140UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G55500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.205; coverage=84.502; evalue=9.68e-92UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G56320KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.828; coverage=83.764; evalue=6.88e-91UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os01g0823100KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.444; coverage=83.026; evalue=3.57e-91UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0583500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.126; coverage=87.823; evalue=1.16e-120UniProtKB/Swiss-Prot DAT 2026 current_release