Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_013696 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:34295251-34297063 (+) |
| Description | Similar to HACL: 2-hydroxyacyl-CoA lyase (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_013696 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 21 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g17380 |
Catalyzes a carbon-carbon cleavage reaction; cleaves a 2-hydroxy-3-methylacyl-CoA into formyl-CoA and a 2-methyl-branched fatty aldehyde. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os01g0505400 |
Catalyzes a carbon-carbon cleavage reaction; cleaves a 2-hydroxy-3-methylacyl-CoA into formyl-CoA and a 2-methyl-branched fatty aldehyde. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001561 | fatty acid alpha-oxidation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=100.175; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006625 | protein targeting to peroxisome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.96; coverage=97.023; evalue=4.63e-153; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006629 | lipid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.219; coverage=96.848; evalue=2.56e-152; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006631 | fatty acid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.96; coverage=97.023; evalue=4.63e-153; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033306 | phytol metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=100.175; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097089 | methyl-branched fatty acid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.96; coverage=97.023; evalue=4.63e-153; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903512 | phytanic acid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.96; coverage=97.023; evalue=4.63e-153; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.029; coverage=96.673; evalue=3.28e-150; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005777 | peroxisome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=100.175; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005782 | peroxisomal matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.96; coverage=97.023; evalue=4.63e-153; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=100.175; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=100.175; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=100.175; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000287 | magnesium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=100.175; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.96; coverage=97.023; evalue=4.63e-153; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016829 | lyase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.219; coverage=96.848; evalue=2.56e-152; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016830 | carbon-carbon lyase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.96; coverage=97.023; evalue=4.63e-153; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030976 | thiamine pyrophosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=100.175; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.96; coverage=97.023; evalue=4.63e-153; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106359 | 2-hydroxyacyl-CoA lyase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=76.095; coverage=95.972; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106376 | 2-hydroxyphytanoyl-CoA lyase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=100.175; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G17380 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=100.175; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0505400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=76.095; coverage=95.972; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:26061 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.96; coverage=97.023; evalue=4.63e-153 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:56794 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.029; coverage=96.673; evalue=3.28e-150 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:85255 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.219; coverage=96.848; evalue=2.56e-152 | UniProtKB/Swiss-Prot DAT 2026 current_release |