Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_013398 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:29012256-29015185 (-) |
| Description | Similar to CNGC2: Cyclic nucleotide-gated ion channel 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_013398 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 24 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g15410 |
Acts as a cyclic nucleotide-gated ion channel. | |
At5g54250 |
Acts as a cyclic nucleotide-gated ion channel. | |
At3g17700 |
Probable cyclic nucleotide-gated ion channel. | No verified direct reference in this release |
At3g17690 |
Putative cyclic nucleotide-gated ion channel. | No verified direct reference in this release |
At1g01340 |
Probable cyclic nucleotide-gated ion channel. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007263 | nitric oxide mediated signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009617 | response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.554; coverage=79.557; evalue=4.88e-34; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009624 | response to nematode | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.973; coverage=72.414; evalue=4.58e-44; UniProt GO evidence=HEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009626 | plant-type hypersensitive response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033198 | response to ATP | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.107; coverage=73.645; evalue=2.35e-39; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051592 | response to calcium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.554; coverage=79.557; evalue=4.88e-34; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070509 | calcium ion import | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080027 | response to herbivore | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.107; coverage=73.645; evalue=2.35e-39; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.554; coverage=79.557; evalue=4.88e-34; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.973; coverage=72.414; evalue=4.58e-44; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.173; coverage=79.803; evalue=3.08e-48; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005216 | monoatomic ion channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.173; coverage=79.803; evalue=3.08e-48; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005221 | intracellularly cyclic nucleotide-activated monoatomic cation channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005222 | intracellularly cAMP-activated cation channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005242 | inward rectifier potassium channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005262 | calcium channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005516 | calmodulin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008324 | monoatomic cation transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.173; coverage=79.803; evalue=3.08e-48; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030552 | cAMP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030553 | cGMP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099604 | ligand-gated calcium channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.107; coverage=73.645; evalue=2.35e-39; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G01340 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.554; coverage=79.557; evalue=4.88e-34 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G17690 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.107; coverage=73.645; evalue=2.35e-39 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G17700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.973; coverage=72.414; evalue=4.58e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G15410 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.724; coverage=89.163; evalue=2.19e-107 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G54250 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.173; coverage=79.803; evalue=3.08e-48 | UniProtKB/Swiss-Prot DAT 2026 current_release |