Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_013217 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:26131100-26132824 (-) |
| Description | Similar to At5g14170: SWI/SNF complex component SNF12 homolog (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_013217 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 47 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g14170 |
Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.968; coverage=81.25; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006337 | nucleosome disassembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.624; coverage=69.485; evalue=6.94e-87; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.968; coverage=81.25; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.968; coverage=81.25; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008284 | positive regulation of cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009909 | regulation of flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.968; coverage=81.25; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010224 | response to UV-B | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.968; coverage=81.25; evalue=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.968; coverage=81.25; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010628 | positive regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.624; coverage=69.485; evalue=6.94e-87; UniProt GO evidence=IGI:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010971 | positive regulation of G2/M transition of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.623; coverage=70.772; evalue=1.39e-84; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030071 | regulation of mitotic metaphase/anaphase transition | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031453 | positive regulation of heterochromatin formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.624; coverage=69.485; evalue=6.94e-87; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040029 | epigenetic regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.968; coverage=81.25; evalue=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045596 | negative regulation of cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045597 | positive regulation of cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045815 | transcription initiation-coupled chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.624; coverage=69.485; evalue=6.94e-87; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.968; coverage=81.25; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070316 | regulation of G0 to G1 transition | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071398 | cellular response to fatty acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902459 | positive regulation of stem cell population maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000024 | regulation of leaf development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.968; coverage=81.25; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000045 | regulation of G1/S transition of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000781 | positive regulation of double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000819 | regulation of nucleotide-excision repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000776 | kinetochore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000791 | euchromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.624; coverage=69.485; evalue=6.94e-87; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.968; coverage=81.25; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.623; coverage=70.772; evalue=1.39e-84; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016363 | nuclear matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016514 | SWI/SNF complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.968; coverage=81.25; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035060 | brahma complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.624; coverage=69.485; evalue=6.94e-87; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001221 | transcription coregulator binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.623; coverage=70.772; evalue=1.39e-84; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.624; coverage=69.485; evalue=6.94e-87; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003712 | transcription coregulator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.624; coverage=69.485; evalue=6.94e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003713 | transcription coactivator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=NAS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005102 | signaling receptor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016922 | nuclear receptor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.623; coverage=70.772; evalue=1.39e-84; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017022 | myosin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.624; coverage=69.485; evalue=6.94e-87; UniProt GO evidence=IPI:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019904 | protein domain specific binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.624; coverage=69.485; evalue=6.94e-87; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060090 | molecular adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061629 | RNA polymerase II-specific DNA-binding transcription factor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.624; coverage=69.485; evalue=6.94e-87; UniProt GO evidence=IPI:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140297 | DNA-binding transcription factor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.623; coverage=70.772; evalue=1.39e-84; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G14170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.968; coverage=81.25; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG4303 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.624; coverage=69.485; evalue=6.94e-87 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:6602 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.831; coverage=81.801; evalue=3.03e-85 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:66993 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.623; coverage=70.772; evalue=1.39e-84 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:83797 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.831; coverage=81.801; evalue=3.51e-85 | UniProtKB/Swiss-Prot DAT 2026 current_release |