Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_012912 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:20770835-20771857 (-) |
| Description | Similar to ZAT5: Zinc finger protein ZAT5 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_012912 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 23 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g28200 |
Probable transcription factor that may be involved in stress responses. | No verified direct reference in this release |
At3g46080 |
Probable transcription factor that may be involved in stress responses. | No verified direct reference in this release |
At3g46090 |
Probable transcription factor involved in oxidative stress response. | |
At2g37430 |
Probable transcription factor that may be involved in stress responses. | No verified direct reference in this release |
At5g59820 |
Transcriptional repressor involved in light acclimation, cold and oxidative stress responses. |
A zinc finger protein RHL41 mediates the light acclimatization response in Arabidopsis.2000 · DOI: 10.1046/j.1365-313x.2000.00864.x The zinc finger protein Zat12 is required for cytosolic ascorbate peroxidase 1 expression during oxidative stress in Arabidopsis.2004 · DOI: 10.1074/jbc.m313350200
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.752; coverage=102.059; evalue=8.56e-49; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.752; coverage=102.059; evalue=8.56e-49; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006950 | response to stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.576; coverage=48.529; evalue=7.99e-19; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006979 | response to oxidative stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.481; coverage=63.529; evalue=1.37e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009408 | response to heat | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.013; coverage=45.294; evalue=2.94e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.752; coverage=102.059; evalue=8.56e-49; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009416 | response to light stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.013; coverage=45.294; evalue=2.94e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009611 | response to wounding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.013; coverage=45.294; evalue=2.94e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009617 | response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.576; coverage=48.529; evalue=7.99e-19; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009631 | cold acclimation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.013; coverage=45.294; evalue=2.94e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009643 | photosynthetic acclimation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.013; coverage=45.294; evalue=2.94e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010200 | response to chitin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.576; coverage=48.529; evalue=7.99e-19; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010224 | response to UV-B | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.013; coverage=45.294; evalue=2.94e-18; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042538 | hyperosmotic salinity response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.013; coverage=45.294; evalue=2.94e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045926 | negative regulation of growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.481; coverage=63.529; evalue=1.37e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071289 | cellular response to nickel ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.714; coverage=45.294; evalue=1.88e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071456 | cellular response to hypoxia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.576; coverage=48.529; evalue=7.99e-19; UniProt GO evidence=HEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071731 | response to nitric oxide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.576; coverage=48.529; evalue=7.99e-19; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000280 | regulation of root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.714; coverage=45.294; evalue=1.88e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.752; coverage=102.059; evalue=8.56e-49; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.752; coverage=102.059; evalue=8.56e-49; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.752; coverage=102.059; evalue=8.56e-49; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.752; coverage=102.059; evalue=8.56e-49; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G28200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.752; coverage=102.059; evalue=8.56e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G37430 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.714; coverage=45.294; evalue=1.88e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G46080 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.576; coverage=48.529; evalue=7.99e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G46090 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.481; coverage=63.529; evalue=1.37e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G59820 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.013; coverage=45.294; evalue=2.94e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release |