Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_012745`
Query reference	OH1004
Location	Chr03:18090100-18092885 (-)
Description	Similar to THA1: Probable low-specificity L-threonine aldolase 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_012745 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 7 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g08630`	Threonine aldolase involved in threonine degradation to glycine.	Application of a high-throughput HPLC-MS/MS assay to Arabidopsis mutant screening; evidence that threonine aldolase plays a role in seed nutritional quality.2004 · DOI: 10.1111/j.1365-313x.2004.02140.x Two Arabidopsis threonine aldolases are nonredundant and compete with threonine deaminase for a common substrate pool.2006 · DOI: 10.1105/tpc.106.044958
`At3g04520`	Threonine aldolase involved in threonine degradation to glycine.	Two Arabidopsis threonine aldolases are nonredundant and compete with threonine deaminase for a common substrate pool.2006 · DOI: 10.1105/tpc.106.044958

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006545	glycine biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.751; coverage=90.306; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006567	L-threonine catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.751; coverage=90.306; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.349; coverage=87.755; evalue=4.4e-179; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.751; coverage=90.306; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.751; coverage=90.306; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004793	threonine aldolase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.751; coverage=90.306; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008732	L-allo-threonine aldolase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.751; coverage=90.306; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ag:BAA20404	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.81; coverage=85.714; evalue=1.45e-100	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G08630	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.751; coverage=90.306; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G04520	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.349; coverage=87.755; evalue=4.4e-179	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	cel:CELE_R102.4	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.828; coverage=88.776; evalue=1.18e-86	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ece:Z1104	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.073; coverage=83.929; evalue=1.68e-86	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ecs:ECs_0956	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.073; coverage=83.929; evalue=1.68e-86	UniProtKB/Swiss-Prot DAT 2026 current_release