Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene ID	`LXL04_012730`
Query reference	OH1004
Location	Chr03:17932340-17934854 (+)
Description	Similar to HEXO3: Beta-hexosaminidase 3 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_012730 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 15 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g65590`	Has a broad substrate specificity.	Biosynthesis of truncated N-linked oligosaccharides results from non-orthologous hexosaminidase-mediated mechanisms in nematodes, plants, and insects.2007 · DOI: 10.1074/jbc.m704235200 Enzymatic properties and subcellular localization of Arabidopsis beta-N-acetylhexosaminidases.2007 · DOI: 10.1104/pp.107.101162 Beta-N-acetylhexosaminidases HEXO1 and HEXO3 are responsible for the formation of paucimannosidic N-glycans in Arabidopsis thaliana.2011 · DOI: 10.1074/jbc.m110.178020
`At3g55260`	Has a broad substrate specificity.	Biosynthesis of truncated N-linked oligosaccharides results from non-orthologous hexosaminidase-mediated mechanisms in nematodes, plants, and insects.2007 · DOI: 10.1074/jbc.m704235200 Enzymatic properties and subcellular localization of Arabidopsis beta-N-acetylhexosaminidases.2007 · DOI: 10.1104/pp.107.101162 Beta-N-acetylhexosaminidases HEXO1 and HEXO3 are responsible for the formation of paucimannosidic N-glycans in Arabidopsis thaliana.2011 · DOI: 10.1074/jbc.m110.178020

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0005975	carbohydrate metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.014; coverage=100.393; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006491	N-glycan processing	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.014; coverage=100.393; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030203	glycosaminoglycan metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.014; coverage=100.393; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042742	defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.992; coverage=102.554; evalue=4.68e-75; UniProt GO evidence=HDA:dictyBase	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000325	plant-type vacuole	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.49; coverage=101.768; evalue=4.71e-163; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.014; coverage=100.393; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005764	lysosome	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.824; coverage=102.947; evalue=8.72e-85; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005773	vacuole	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.49; coverage=101.768; evalue=4.71e-163; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.014; coverage=100.393; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009505	plant-type cell wall	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.014; coverage=100.393; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.49; coverage=101.768; evalue=4.71e-163; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.014; coverage=100.393; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0099503	secretory vesicle	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.49; coverage=101.768; evalue=4.71e-163; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004563	beta-N-acetylhexosaminidase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.014; coverage=100.393; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015929	hexosaminidase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.014; coverage=100.393; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G65590	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.014; coverage=100.393; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G55260	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.49; coverage=101.768; evalue=4.71e-163	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ddi:DDB_G0287033	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.992; coverage=102.554; evalue=4.68e-75	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ddi:DDB_G0287597	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.09; coverage=105.305; evalue=1.36e-78	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ddi:DDB_G0287659	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.824; coverage=102.947; evalue=8.72e-85	UniProtKB/Swiss-Prot DAT 2026 current_release