Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_012727 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:17901311-17901682 (+) |
| Description | Similar to TRM112B: Multifunctional methyltransferase subunit TRM112 homolog B (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_012727 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 27 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g78190 |
Acts as an activator of both rRNA/tRNA and protein methyltransferases (By similarity). | |
At1g22270 |
Acts as an activator of both rRNA/tRNA and protein methyltransferases (By similarity). |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000470 | maturation of LSU-rRNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.194; coverage=100.813; evalue=3.71e-65; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001510 | RNA methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.161; coverage=100.813; evalue=1.18e-33; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002098 | tRNA wobble uridine modification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0018364 | peptidyl-glutamine methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030488 | tRNA methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030490 | maturation of SSU-rRNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.194; coverage=100.813; evalue=3.71e-65; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031167 | rRNA methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035265 | organ growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=79.032; coverage=100.813; evalue=3.75e-56; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042127 | regulation of cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=79.032; coverage=100.813; evalue=3.75e-56; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045815 | transcription initiation-coupled chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051726 | regulation of cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=79.032; coverage=100.813; evalue=3.75e-56; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070476 | rRNA (guanine-N7)-methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000234 | positive regulation of rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.194; coverage=100.813; evalue=3.71e-65; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.194; coverage=100.813; evalue=3.71e-65; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.194; coverage=100.813; evalue=3.71e-65; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.161; coverage=100.813; evalue=1.18e-33; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034708 | methyltransferase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035097 | histone methyltransferase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036396 | RNA N6-methyladenosine methyltransferase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043527 | tRNA methyltransferase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043528 | tRNA (m2G10) methyltransferase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.194; coverage=100.813; evalue=3.71e-65; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008276 | protein methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046982 | protein heterodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.194; coverage=100.813; evalue=3.71e-65; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0141106 | tRNA methyltransferase activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.194; coverage=100.813; evalue=3.71e-65; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G22270 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=79.032; coverage=100.813; evalue=3.75e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G78190 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.194; coverage=100.813; evalue=3.71e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:507833 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.387; coverage=100.813; evalue=3.09e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:51504 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.161; coverage=100.813; evalue=1.18e-33 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:67674 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.581; coverage=100.813; evalue=4.82e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release |