Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_011998 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:4442464-4446306 (+) |
| Description | Similar to FUC1: Alpha-L-fucosidase 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_011998 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 15 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g28100 |
Hydrolyzes both 3- and 4-linked fucoses in Lewis determinants. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os04g0560400 |
Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006004 | fucose metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.386; coverage=93.827; evalue=9.54e-177; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006516 | glycoprotein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.386; coverage=93.827; evalue=9.54e-177; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009617 | response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.61; coverage=67.49; evalue=2.23e-06; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016139 | glycoside catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.386; coverage=93.827; evalue=9.54e-177; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000535 | regulation of entry of bacterium into host cell | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.61; coverage=67.49; evalue=2.23e-06; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.386; coverage=93.827; evalue=9.54e-177; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.386; coverage=93.827; evalue=9.54e-177; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005615 | extracellular space | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.61; coverage=67.49; evalue=2.23e-06; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005764 | lysosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.386; coverage=93.827; evalue=9.54e-177; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005788 | endoplasmic reticulum lumen | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.61; coverage=67.49; evalue=2.23e-06; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035578 | azurophil granule lumen | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.61; coverage=67.49; evalue=2.23e-06; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048046 | apoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.386; coverage=93.827; evalue=9.54e-177; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.61; coverage=67.49; evalue=2.23e-06; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099503 | secretory vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.386; coverage=93.827; evalue=9.54e-177; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004560 | alpha-L-fucosidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.386; coverage=93.827; evalue=9.54e-177; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G28100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.386; coverage=93.827; evalue=9.54e-177 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:2519 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.61; coverage=67.49; evalue=2.23e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release |