Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_011908 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:2590196-2591793 (-) |
| Description | Similar to ASK21: SKP1-like protein 21 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_011908 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 23 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g61415 |
Involved in ubiquitination and subsequent proteasomal degradation of target proteins. | No verified direct reference in this release |
At2g45950 |
Involved in ubiquitination and subsequent proteasomal degradation of target proteins. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000018 | regulation of DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.247; coverage=45.768; evalue=5.03e-17; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000278 | mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.247; coverage=45.768; evalue=5.03e-17; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000712 | resolution of meiotic recombination intermediates | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.247; coverage=45.768; evalue=5.03e-17; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.633; coverage=102.508; evalue=1.01e-119; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.633; coverage=102.508; evalue=1.01e-119; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009753 | response to jasmonic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.633; coverage=102.508; evalue=1.01e-119; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009867 | jasmonic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.633; coverage=102.508; evalue=1.01e-119; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.633; coverage=102.508; evalue=1.01e-119; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.633; coverage=102.508; evalue=1.01e-119; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045841 | negative regulation of mitotic metaphase/anaphase transition | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.247; coverage=45.768; evalue=5.03e-17; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0101026 | mitotic nuclear membrane biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.247; coverage=45.768; evalue=5.03e-17; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.633; coverage=102.508; evalue=1.01e-119; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.633; coverage=102.508; evalue=1.01e-119; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005938 | cell cortex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.899; coverage=46.708; evalue=1.28e-17; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017117 | single-stranded DNA-dependent ATP-dependent DNA helicase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.247; coverage=45.768; evalue=5.03e-17; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019005 | SCF ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.633; coverage=102.508; evalue=1.01e-119; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043223 | cytoplasmic SCF ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.899; coverage=46.708; evalue=1.28e-17; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043224 | nuclear SCF ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.247; coverage=45.768; evalue=5.03e-17; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043291 | RAVE complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.247; coverage=45.768; evalue=5.03e-17; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.899; coverage=46.708; evalue=1.28e-17; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071987 | WD40-repeat domain binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.899; coverage=46.708; evalue=1.28e-17; UniProt GO evidence=IPI:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097602 | cullin family protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.633; coverage=102.508; evalue=1.01e-119; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990444 | F-box domain binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.899; coverage=46.708; evalue=1.28e-17; UniProt GO evidence=IPI:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G45950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.129; coverage=100.0; evalue=5.99e-114 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G61415 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.633; coverage=102.508; evalue=1.01e-119 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0269230 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.899; coverage=46.708; evalue=1.28e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0273251 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.899; coverage=46.708; evalue=1.79e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0273615 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.899; coverage=46.708; evalue=1.79e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ncr:NCU08991 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.247; coverage=45.768; evalue=5.03e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release |