Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_011830 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:1142287-1144709 (+) |
| Description | Similar to COL5: Zinc finger protein CONSTANS-LIKE 5 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_011830 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 16 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g57660 |
Zinc finger protein CONSTANS-LIKE 5. | No verified direct reference in this release |
At5g15850 |
Putative transcription factor that may be involved in the light input to the circadian clock but does not affect flowering time. | No verified direct reference in this release |
At5g24930 |
Zinc finger protein CONSTANS-LIKE 4. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os09g0240200 |
Probable transcription factor involved in the regulation of flowering time under short day (SD) conditions. | No verified direct reference in this release |
Os07g0261200 |
Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.047; coverage=27.832; evalue=3.71e-08; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.167; coverage=15.534; evalue=8.03e-09; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007623 | circadian rhythm | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.0; coverage=18.123; evalue=1.06e-07; UniProt GO evidence=IMP:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.047; coverage=27.832; evalue=3.71e-08; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009909 | regulation of flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.167; coverage=15.534; evalue=8.03e-09; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032922 | circadian regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.0; coverage=25.89; evalue=1.07e-07; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048577 | negative regulation of short-day photoperiodism, flowering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.047; coverage=27.832; evalue=3.71e-08; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048579 | negative regulation of long-day photoperiodism, flowering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.283; coverage=17.152; evalue=1.06e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000028 | regulation of photoperiodism, flowering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.047; coverage=27.832; evalue=3.71e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.167; coverage=15.534; evalue=8.03e-09; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.0; coverage=25.89; evalue=1.07e-07; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.167; coverage=15.534; evalue=8.03e-09; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.047; coverage=27.832; evalue=3.71e-08; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.167; coverage=15.534; evalue=8.03e-09; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.167; coverage=15.534; evalue=8.03e-09; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.0; coverage=18.123; evalue=1.06e-07; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G15850 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.0; coverage=18.123; evalue=1.06e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G24930 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.0; coverage=25.89; evalue=1.07e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G57660 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.167; coverage=15.534; evalue=8.03e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os09g0240200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.047; coverage=27.832; evalue=3.71e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:107276161 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.283; coverage=17.152; evalue=1.06e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4346474 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.047; coverage=27.832; evalue=3.71e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release |