Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_010498 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:147785972-147789988 (-) |
| Description | Similar to KU80: ATP-dependent DNA helicase 2 subunit KU80 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_010498 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 58 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g48050 |
Single-stranded DNA-dependent ATP-dependent helicase. |
Telomere length deregulation and enhanced sensitivity to genotoxic stress in Arabidopsis mutants deficient in Ku70.2002 · DOI: 10.1093/emboj/21.11.2819 Disruption of the Arabidopsis AtKu80 gene demonstrates an essential role for AtKu80 protein in efficient repair of DNA double-strand breaks in vivo.2002 · DOI: 10.1046/j.1365-313x.2002.01370.x
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os03g0856200 |
Single-stranded DNA-dependent ATP-dependent helicase. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000723 | telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000725 | recombinational repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002218 | activation of innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006303 | double-strand break repair via nonhomologous end joining | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.51; coverage=109.728; evalue=4.16e-86; UniProt GO evidence=IMP:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007004 | telomere maintenance via telomerase | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008283 | cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009408 | response to heat | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015074 | DNA integration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034462 | small-subunit processome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045087 | innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048660 | regulation of smooth muscle cell proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070198 | protein localization to chromosome, telomeric region | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071475 | cellular hyperosmotic salinity response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071480 | cellular response to gamma radiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071481 | cellular response to X-ray | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904430 | negative regulation of t-circle formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990830 | cellular response to leukemia inhibitory factor | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=IEP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.51; coverage=109.728; evalue=4.16e-86; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.275; coverage=104.149; evalue=1.49e-51; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.275; coverage=104.149; evalue=1.49e-51; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005958 | DNA-dependent protein kinase-DNA ligase 4 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032040 | small-subunit processome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032993 | protein-DNA complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043564 | Ku70:Ku80 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070418 | DNA-dependent protein kinase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070419 | nonhomologous end joining complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090734 | site of DNA damage | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990904 | ribonucleoprotein complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003678 | DNA helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003684 | damaged DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003690 | double-stranded DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003691 | double-stranded telomeric DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008094 | ATP-dependent activity, acting on DNA | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.51; coverage=109.728; evalue=4.16e-86; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031625 | ubiquitin protein ligase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034511 | U3 snoRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042162 | telomeric DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043138 | 3'-5' DNA helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.275; coverage=104.149; evalue=1.49e-51; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045027 | DNA end binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051575 | 5'-deoxyribose-5-phosphate lyase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140078 | class I DNA-(apurinic or apyrimidinic site) endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.275; coverage=104.149; evalue=1.49e-51; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G48050 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.712; coverage=97.711; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0286303 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.51; coverage=109.728; evalue=4.16e-86 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0856200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.249; coverage=98.999; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:22596 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.861; coverage=103.004; evalue=1.32e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:394397 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.275; coverage=104.149; evalue=1.49e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release |