Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_010488`
Query reference	OH1004
Location	Chr02:147663225-147664771 (+)
Description	Similar to ARGAH1: Arginase 1%2C mitochondrial (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_010488 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 19 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At4g08900`	Hydrolyzes L-arginine to urea and L-ornithine; the former is involved in recycling of nitrogen into ammonium and the latter feeds back into the urea cycle or serves as a precursor for polyamine and proline synthesis.	Dual functioning of plant arginases provides a third route for putrescine synthesis.2017 · DOI: 10.1016/j.plantsci.2017.05.011
`At4g08870`	Hydrolyzes L-arginine to urea and L-ornithine; the former is involved in recycling of nitrogen into ammonium and the latter feeds back into the urea cycle or serves as a precursor for polyamine and proline synthesis.	Dual functioning of plant arginases provides a third route for putrescine synthesis.2017 · DOI: 10.1016/j.plantsci.2017.05.011 Phosphatidic acid binds to and stimulates the activity of ARGAH2 from Arabidopsis.2022 · DOI: 10.1016/j.plaphy.2022.06.018

Rice

Reference gene ID	Possible function	Papers / DOI
`UniProt: B8AU84`	Hydrolyzes L-arginine to urea and L-ornithine; the former is involved in recycling of nitrogen into ammonium and the latter feeds back into the urea cycle or serves as a precursor for polyamine and proline synthesis.	No verified direct reference in this release
`Os04g0106300`	Hydrolyzes L-arginine to urea and L-ornithine; the former is involved in recycling of nitrogen into ammonium and the latter feeds back into the urea cycle or serves as a precursor for polyamine and proline synthesis.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0000050	urea cycle	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.828; coverage=100.595; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathway	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006527	L-arginine catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.828; coverage=100.595; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006560	proline metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=81.977; coverage=102.381; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006570	tyrosine metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=81.977; coverage=102.381; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006591	ornithine metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=81.977; coverage=102.381; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009445	putrescine metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=81.977; coverage=102.381; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009446	putrescine biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=81.977; coverage=102.381; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0033389	putrescine biosynthetic process from arginine, via agmatine	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.828; coverage=100.595; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0034214	protein hexamerization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.828; coverage=100.595; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050832	defense response to fungus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=81.977; coverage=102.381; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.828; coverage=100.595; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.828; coverage=100.595; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009570	chloroplast stroma	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=81.977; coverage=102.381; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000287	magnesium ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.828; coverage=100.595; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004053	arginase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.828; coverage=100.595; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008783	agmatinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.828; coverage=100.595; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030145	manganese ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.03; coverage=99.405; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=85.03; coverage=99.405; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050897	cobalt ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.828; coverage=100.595; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G08870	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=81.977; coverage=102.381; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G08900	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.828; coverage=100.595; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os04g0106300	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=85.03; coverage=99.405; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	mtr:11420737	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=74.852; coverage=100.595; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release