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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_010428
Query referenceOH1004
LocationChr02:146412944-146414778 (-)
DescriptionSimilar to AMC4: Metacaspase-4 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_010428 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 19 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g79340 Cysteine protease that cleaves specifically after arginine or lysine residues.
Calcium-dependent activation and autolysis of Arabidopsis metacaspase 2d.2011 · DOI: 10.1074/jbc.m110.194340
Arabidopsis metacaspase 2d is a positive mediator of cell death induced during biotic and abiotic stresses.2011 · DOI: 10.1111/j.1365-313x.2011.04554.x
At1g79330 Cysteine protease that cleaves specifically after arginine or lysine residues.
Two Arabidopsis metacaspases AtMCP1b and AtMCP2b are arginine/lysine-specific cysteine proteases and activate apoptosis-like cell death in yeast.2005 · DOI: 10.1074/jbc.m413527200
At1g79320 Metacaspase-6. No verified direct reference in this release
At1g79310 Metacaspase-7. No verified direct reference in this release
At1g16420 Cysteine protease that cleaves specifically after arginine residues. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006508proteolysisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006952defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006979response to oxidative stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.509; coverage=102.613; evalue=5.27e-98; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010225response to UV-CBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.509; coverage=102.613; evalue=5.27e-98; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010421hydrogen peroxide-mediated programmed cell deathBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.509; coverage=102.613; evalue=5.27e-98; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0012501programmed cell deathBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.509; coverage=102.613; evalue=5.27e-98; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016540protein autoprocessingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042542response to hydrogen peroxideBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.509; coverage=102.613; evalue=5.27e-98; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043068positive regulation of programmed cell deathBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.702; coverage=100.475; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004197cysteine-type endopeptidase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008234cysteine-type peptidase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042802identical protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0; UniProt GO evidence=IPI:IntActUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G16420KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.509; coverage=102.613; evalue=5.27e-98UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G79310KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.103; coverage=101.663; evalue=1.37e-150UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G79320KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.92; coverage=100.475; evalue=3.94e-162UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G79330KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.702; coverage=100.475; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G79340KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=101.663; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release