Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_010376 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:145486960-145487898 (+) |
| Description | Similar to Ctdsp2: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 (Mus musculus OX%3D10090) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_010376 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001933 | negative regulation of protein phosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.984; coverage=58.654; evalue=1.76e-37; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006470 | protein dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.984; coverage=58.654; evalue=1.76e-37; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.169; coverage=58.654; evalue=8.77e-36; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034198 | cellular response to amino acid starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.169; coverage=58.654; evalue=8.77e-36; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.169; coverage=58.654; evalue=8.77e-36; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904262 | negative regulation of TORC1 signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.169; coverage=58.654; evalue=8.77e-36; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000134 | negative regulation of G1/S transition of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.984; coverage=58.654; evalue=1.76e-37; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.984; coverage=58.654; evalue=1.76e-37; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.897; coverage=75.0; evalue=1.77e-37; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.169; coverage=58.654; evalue=8.77e-36; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004721 | phosphoprotein phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.169; coverage=58.654; evalue=8.77e-36; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008420 | RNA polymerase II CTD heptapeptide repeat phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.984; coverage=58.654; evalue=1.76e-37; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.984; coverage=58.654; evalue=1.76e-37; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0180007 | RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.169; coverage=58.654; evalue=8.77e-36; UniProt GO evidence=ISS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | gga:408252 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.956; coverage=58.333; evalue=3.32e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10106 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.897; coverage=75.0; evalue=1.77e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:52468 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.984; coverage=58.654; evalue=1.76e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:69274 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.91; coverage=53.526; evalue=8.24e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2541901 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.169; coverage=58.654; evalue=8.77e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release |