Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_010258 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:143346792-143361843 (+) |
| Description | Similar to Ring1: E3 ubiquitin-protein ligase RING1 (Mus musculus OX%3D10090) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_010258 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 29 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006325 | chromatin organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.154; coverage=39.912; evalue=3.41e-19; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009948 | anterior/posterior axis specification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.154; coverage=39.912; evalue=3.41e-19; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009952 | anterior/posterior pattern specification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010467 | gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031507 | heterochromatin formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=42.982; evalue=3.37e-19; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=42.982; evalue=3.37e-19; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.154; coverage=39.912; evalue=3.41e-19; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000151 | ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=42.982; evalue=3.37e-19; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001739 | sex chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005635 | nuclear envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.154; coverage=39.912; evalue=3.41e-19; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.154; coverage=39.912; evalue=3.41e-19; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031519 | PcG protein complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035102 | PRC1 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.154; coverage=39.912; evalue=3.41e-19; UniProt GO evidence=ISS:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097027 | ubiquitin-protein transferase activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | cfa:607905 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=42.982; evalue=3.03e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG5595 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.154; coverage=39.912; evalue=3.41e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:6015 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=42.982; evalue=3.37e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:19763 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.857; coverage=42.982; evalue=2.46e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:309626 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=42.982; evalue=2.64e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release |