Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_009240 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:121193393-121194565 (-) |
| Description | Similar to NUP35: Nuclear pore complex protein NUP35 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_009240 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 17 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g16310 |
Nuclear pore complex protein NUP35. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006607 | NLS-bearing protein import into nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.069; coverage=101.765; evalue=2.49e-115; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006913 | nucleocytoplasmic transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.968; coverage=45.588; evalue=3.26e-13; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006999 | nuclear pore organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.069; coverage=101.765; evalue=2.49e-115; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051028 | mRNA transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.069; coverage=101.765; evalue=2.49e-115; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990830 | cellular response to leukemia inhibitory factor | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.613; coverage=45.588; evalue=5.79e-13; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005635 | nuclear envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.968; coverage=45.588; evalue=3.26e-13; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005652 | nuclear lamina | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.613; coverage=45.588; evalue=5.79e-13; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.099; coverage=47.647; evalue=7.12e-13; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.968; coverage=45.588; evalue=3.26e-13; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.099; coverage=47.647; evalue=7.12e-13; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031965 | nuclear membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.069; coverage=101.765; evalue=2.49e-115; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044613 | nuclear pore central transport channel | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.069; coverage=101.765; evalue=2.49e-115; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044615 | nuclear pore nuclear basket | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.069; coverage=101.765; evalue=2.49e-115; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003676 | nucleic acid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.069; coverage=101.765; evalue=2.49e-115; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005543 | phospholipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.069; coverage=101.765; evalue=2.49e-115; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017056 | structural constituent of nuclear pore | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.069; coverage=101.765; evalue=2.49e-115; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.968; coverage=45.588; evalue=3.26e-13; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G16310 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.069; coverage=101.765; evalue=2.49e-115 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:337461 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.605; coverage=44.706; evalue=2.6e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:129401 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.968; coverage=45.588; evalue=3.26e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:69482 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.099; coverage=47.647; evalue=7.12e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:295692 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.613; coverage=45.588; evalue=5.79e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release |