Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_008648`
Query reference	OH1004
Location	Chr02:105157094-105158652 (+)
Description	Similar to ARAD1: Probable arabinosyltransferase ARAD1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_008648 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 22 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g35100`	Probable arabinosyl transferase responsible for the polymerization of arabinose into the arabinan of arabinogalactan.	ARABINAN DEFICIENT 1 is a putative arabinosyltransferase involved in biosynthesis of pectic arabinan in Arabidopsis.2006 · DOI: 10.1104/pp.105.072744 Cell wall pectic arabinans influence the mechanical properties of Arabidopsis thaliana inflorescence stems and their response to mechanical stress.2013 · DOI: 10.1093/pcp/pct074
`At5g44930`	Probable arabinosyl transferase responsible for the polymerization of arabinose into the arabinan of arabinogalactan.	Cell wall pectic arabinans influence the mechanical properties of Arabidopsis thaliana inflorescence stems and their response to mechanical stress.2013 · DOI: 10.1093/pcp/pct074
`At3g42180`	May be involved in cell wall biosynthesis.	No verified direct reference in this release
`At5g33290`	Involved in pectin biosynthesis.	Identification of a xylogalacturonan xylosyltransferase involved in pectin biosynthesis in Arabidopsis.2008 · DOI: 10.1105/tpc.107.050906

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0009101	glycoprotein biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.157; coverage=81.237; evalue=9.95e-79; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009832	plant-type cell wall biogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.022; coverage=79.318; evalue=1.73e-66; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009834	plant-type secondary cell wall biogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.25; coverage=85.288; evalue=2.88e-14; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010398	xylogalacturonan metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.503; coverage=64.392; evalue=4.29e-15; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010417	glucuronoxylan biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.25; coverage=85.288; evalue=2.88e-14; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0035884	arabinan biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.022; coverage=79.318; evalue=1.73e-66; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045489	pectin biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.157; coverage=81.237; evalue=9.95e-79; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045492	xylan biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.25; coverage=85.288; evalue=2.88e-14; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071555	cell wall organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.157; coverage=81.237; evalue=9.95e-79; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000138	Golgi trans cisterna	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.157; coverage=81.237; evalue=9.95e-79; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000139	Golgi membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.157; coverage=81.237; evalue=9.95e-79; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005576	extracellular region	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.366; coverage=34.968; evalue=2.36e-17; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.022; coverage=79.318; evalue=1.73e-66; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.366; coverage=34.968; evalue=2.36e-17; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005768	endosome	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.157; coverage=81.237; evalue=9.95e-79; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005794	Golgi apparatus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.157; coverage=81.237; evalue=9.95e-79; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005802	trans-Golgi network	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.157; coverage=81.237; evalue=9.95e-79; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.503; coverage=64.392; evalue=4.29e-15; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016757	glycosyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.157; coverage=81.237; evalue=9.95e-79; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0035252	UDP-xylosyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.503; coverage=64.392; evalue=4.29e-15; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080116	glucuronoxylan glucuronosyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.25; coverage=85.288; evalue=2.88e-14; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0102983	xylogalacturonan beta-1,3-xylosyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.503; coverage=64.392; evalue=4.29e-15; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G35100	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.157; coverage=81.237; evalue=9.95e-79	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G42180	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.366; coverage=34.968; evalue=2.36e-17	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G33290	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.503; coverage=64.392; evalue=4.29e-15	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G44930	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.022; coverage=79.318; evalue=1.73e-66	UniProtKB/Swiss-Prot DAT 2026 current_release