Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_008324 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:96557560-96558171 (+) |
| Description | Similar to CHMP1A: ESCRT-related protein CHMP1A (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_008324 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 33 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g17730 |
Involved in ESCRT-dependent multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. | |
At1g73030 |
Involved in ESCRT-dependent multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os06g0643300 |
Involved in ESCRT-dependent multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000578 | embryonic axis specification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.177; coverage=100.0; evalue=2.12e-132; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006623 | protein targeting to vacuole | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.179; coverage=96.059; evalue=3.25e-62; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006914 | autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.177; coverage=100.0; evalue=2.12e-132; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007080 | mitotic metaphase chromosome alignment | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.177; coverage=100.0; evalue=2.12e-132; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.177; coverage=100.0; evalue=2.12e-132; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031468 | nuclear membrane reassembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032509 | endosome transport via multivesicular body sorting pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.177; coverage=100.0; evalue=2.12e-132; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0039702 | viral budding via host ESCRT complex | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043162 | ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045324 | late endosome to vacuole transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.177; coverage=100.0; evalue=2.12e-132; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046761 | viral budding from plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061952 | midbody abscission | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071985 | multivesicular body sorting pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090351 | seedling development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.177; coverage=100.0; evalue=2.12e-132; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097352 | autophagosome maturation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901673 | regulation of mitotic spindle assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902774 | late endosome to lysosome transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000776 | kinetochore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000815 | ESCRT III complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.177; coverage=100.0; evalue=2.12e-132; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.177; coverage=100.0; evalue=2.12e-132; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005643 | nuclear pore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.177; coverage=100.0; evalue=2.12e-132; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=88.177; coverage=100.0; evalue=2.11e-120; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005770 | late endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.179; coverage=96.059; evalue=3.25e-62; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005771 | multivesicular body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.177; coverage=100.0; evalue=2.12e-132; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005828 | kinetochore microtubule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016363 | nuclear matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030496 | midbody | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032585 | multivesicular body membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904930 | amphisome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G17730 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.177; coverage=100.0; evalue=2.12e-132 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G73030 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=88.177; coverage=100.0; evalue=2.11e-120 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0267394 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.179; coverage=96.059; evalue=3.25e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os06g0643300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.439; coverage=100.985; evalue=4.75e-104 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100173638 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.55; coverage=94.089; evalue=1.7e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release |