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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_007269
Query referenceOH1004
LocationChr02:42070750-42072243 (-)
DescriptionSimilar to BHLH121: Transcription factor bHLH121 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_007269 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g19860 Transcription factor bHLH121. No verified direct reference in this release
At4g36060 Transcription factor bHLH11. No verified direct reference in this release
At5g54680 Transcription factor.
An Arabidopsis basic helix-loop-helix leucine zipper protein modulates metal homeostasis and auxin conjugate responsiveness.2006 · DOI: 10.1534/genetics.106.061044

Rice

Reference gene IDPossible functionPapers / DOI
Os03g0379300 Transcription factor that acts as a negative regulator of the iron deficiency response.
Identification of a novel iron regulated basic helix-loop-helix protein involved in Fe homeostasis in Oryza sativa.2010 · DOI: 10.1186/1471-2229-10-166
Os07g0628500 Transcription factor that plays a positive role in salt stress tolerance.
OsJAZ9 acts as a transcriptional regulator in jasmonate signaling and modulates salt stress tolerance in rice.2015 · DOI: 10.1016/j.plantsci.2014.12.010

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.913; coverage=76.033; evalue=1.39e-64; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.888; coverage=44.353; evalue=3.41e-20; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006879intracellular iron ion homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.913; coverage=76.033; evalue=1.39e-64; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010039response to iron ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.069; coverage=55.647; evalue=3.4e-41; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019760glucosinolate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.888; coverage=44.353; evalue=3.41e-20; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.913; coverage=76.033; evalue=1.39e-64; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.069; coverage=55.647; evalue=3.4e-41; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.913; coverage=76.033; evalue=1.39e-64; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.706; coverage=37.466; evalue=3.17e-21; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.913; coverage=76.033; evalue=1.39e-64; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046983protein dimerization activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.913; coverage=76.033; evalue=1.39e-64; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990837sequence-specific double-stranded DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.913; coverage=76.033; evalue=1.39e-64; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G19860KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.913; coverage=76.033; evalue=1.39e-64UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G36060KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.069; coverage=55.647; evalue=3.4e-41UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G54680KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.888; coverage=44.353; evalue=3.41e-20UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0379300KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.706; coverage=37.466; evalue=3.17e-21UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os07g0628500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.211; coverage=39.118; evalue=1.44e-17UniProtKB/Swiss-Prot DAT 2026 current_release