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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_007178
Query referenceOH1004
LocationChr02:38214317-38225040 (-)
DescriptionSimilar to COAD: Phosphopantetheine adenylyltransferase (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_007178 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g18250 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.
4'-phosphopantetheine and coenzyme A biosynthesis in plants.2003 · DOI: 10.1074/jbc.m306321200
The coenzyme a biosynthetic enzyme phosphopantetheine adenylyltransferase plays a crucial role in plant growth, salt/osmotic stress resistance, and seed lipid storage.2008 · DOI: 10.1104/pp.108.124057

Rice

Reference gene IDPossible functionPapers / DOI
Os07g0179400 Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. No verified direct reference in this release
Os02g0134000 Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000122negative regulation of transcription by RNA polymerase IIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.278; coverage=16.162; evalue=2.34e-20; UniProt GO evidence=IDA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.278; coverage=16.162; evalue=2.34e-20; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006629lipid metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.916; coverage=14.703; evalue=1.07e-65; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006970response to osmotic stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.916; coverage=14.703; evalue=1.07e-65; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009651response to salt stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.916; coverage=14.703; evalue=1.07e-65; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015937coenzyme A biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.916; coverage=14.703; evalue=1.07e-65; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019915lipid storageBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.916; coverage=14.703; evalue=1.07e-65; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080020regulation of coenzyme A biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.916; coverage=14.703; evalue=1.07e-65; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.278; coverage=16.162; evalue=2.34e-20; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.916; coverage=14.703; evalue=1.07e-65; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004140dephospho-CoA kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.916; coverage=14.703; evalue=1.07e-65; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004595pantetheine-phosphate adenylyltransferase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.916; coverage=14.703; evalue=1.07e-65; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.916; coverage=14.703; evalue=1.07e-65; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.278; coverage=16.162; evalue=2.34e-20; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G18250KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.916; coverage=14.703; evalue=1.07e-65UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os02g0134000KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.702; coverage=15.825; evalue=1.96e-50UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os07g0179400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.148; coverage=15.152; evalue=1.45e-55UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:9205KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.278; coverage=16.162; evalue=2.34e-20UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmcf:101867372KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.791; coverage=15.039; evalue=1.68e-19UniProtKB/Swiss-Prot DAT 2026 current_release