Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_007092 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:35835459-35844459 (-) |
| Description | Similar to HPT1: Probable homogentisate phytyltransferase 1%2C chloroplastic (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_007092 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 13 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g18950 |
Involved in the synthesis of tocopherol (vitamin E). |
Isolation and characterization of homogentisate phytyltransferase genes from Synechocystis sp. PCC 6803 and Arabidopsis.2002 · DOI: 10.1104/pp.010747 Homogentisate phytyltransferase activity is limiting for tocopherol biosynthesis in Arabidopsis.2003 · DOI: 10.1104/pp.015222
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os06g0658900 |
Involved in the synthesis of tocopherol (vitamin E). | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006636 | unsaturated fatty acid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.669; coverage=23.314; evalue=3.68e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009266 | response to temperature stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.669; coverage=23.314; evalue=3.68e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009915 | phloem sucrose loading | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.669; coverage=23.314; evalue=3.68e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010189 | vitamin E biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.669; coverage=23.314; evalue=4.1e-18; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031347 | regulation of defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.669; coverage=23.314; evalue=3.68e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042362 | fat-soluble vitamin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.669; coverage=23.314; evalue=3.68e-15; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071555 | cell wall organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.669; coverage=23.314; evalue=3.68e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.19; coverage=23.314; evalue=2.74e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.669; coverage=23.314; evalue=4.1e-18; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031969 | chloroplast membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.19; coverage=23.314; evalue=2.74e-15; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004659 | prenyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.19; coverage=23.314; evalue=2.74e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010176 | homogentisate phytyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.669; coverage=23.314; evalue=4.1e-18; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0047292 | trihydroxypterocarpan dimethylallyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.815; coverage=22.929; evalue=3.76e-14; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ag:BAG12671 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.19; coverage=23.314; evalue=3.31e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G18950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.669; coverage=23.314; evalue=3.68e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os06g0658900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.669; coverage=23.314; evalue=4.1e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gmx:100301896 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.815; coverage=22.929; evalue=3.76e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4341727 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.669; coverage=23.314; evalue=4.1e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release |