Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_006805`
Query reference	OH1004
Location	Chr02:25915867-25921627 (+)
Description	Similar to CLF: Histone-lysine N-methyltransferase CLF (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_006805 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 27 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g23380`	Polycomb group (PcG) protein.	Genetic analysis of incurvata mutants reveals three independent genetic operations at work in Arabidopsis leaf morphogenesis.2000 · DOI: 10.1093/genetics/156.3.1363

Rice

Reference gene ID	Possible function	Papers / DOI
`Os06g0275500`	Polycomb group (PcG) protein.	The rice enhancer of zeste [E(z)] genes SDG711 and SDG718 are respectively involved in long day and short day signaling to mediate the accurate photoperiod control of flowering time.2014 · DOI: 10.3389/fpls.2014.00591
`Os03g0307800`	Polycomb group (PcG) protein.	The rice enhancer of zeste [E(z)] genes SDG711 and SDG718 are respectively involved in long day and short day signaling to mediate the accurate photoperiod control of flowering time.2014 · DOI: 10.3389/fpls.2014.00591
`UniProt: Q84UI6`	Polycomb group (PcG) protein.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.332; coverage=97.343; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009294	DNA-mediated transformation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009737	response to abscisic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009738	abscisic acid-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009908	flower development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009909	regulation of flower development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009965	leaf morphogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010048	vernalization response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010228	vegetative to reproductive phase transition of meristem	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030154	cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031507	heterochromatin formation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032259	methylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045814	negative regulation of gene expression, epigenetic	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045815	transcription initiation-coupled chromatin remodeling	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048586	regulation of long-day photoperiodism, flowering	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.332; coverage=97.343; evalue=0.0; UniProt GO evidence=IEA:EnsemblPlants	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048587	regulation of short-day photoperiodism, flowering	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.519; coverage=86.079; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0141044	epigenetic programming in the endosperm	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900055	regulation of leaf senescence	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005677	chromatin silencing complex	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.332; coverage=97.343; evalue=0.0; UniProt GO evidence=IEA:EnsemblPlants	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031519	PcG protein complex	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0001222	transcription corepressor binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003682	chromatin binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003727	single-stranded RNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046976	histone H3K27 methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0140951	histone H3K27 trimethyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G23380	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.883; coverage=98.406; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os03g0307800	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.519; coverage=86.079; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os06g0275500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.85; coverage=96.281; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4340748	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.85; coverage=96.281; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	zma:541954	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.332; coverage=97.343; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release