Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_006608`
Query reference	OH1004
Location	Chr02:19214522-19215079 (-)
Description	Similar to EPFL2: EPIDERMAL PATTERNING FACTOR-like protein 2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_006608 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At4g37810`	Controls stomatal patterning.	No verified direct reference in this release
`At5g10310`	Controls stomatal patterning.	No verified direct reference in this release
`At2g30370`	Acts primarily as positive regulator of inflorescence growth.	Regional specification of stomatal production by the putative ligand CHALLAH.2010 · DOI: 10.1242/dev.040931 Generation of signaling specificity in Arabidopsis by spatially restricted buffering of ligand-receptor interactions.2011 · DOI: 10.1105/tpc.111.086637 Regulation of inflorescence architecture by intertissue layer ligand-receptor communication between endodermis and phloem.2012 · DOI: 10.1073/pnas.1117537109 Regulation of plant vascular stem cells by endodermis-derived EPFL-family peptide hormones and phloem-expressed ERECTA-family receptor kinases.2013 · DOI: 10.1093/jxb/ert196
`At3g22820`	Controls stomatal patterning.	Generation of signaling specificity in Arabidopsis by spatially restricted buffering of ligand-receptor interactions.2011 · DOI: 10.1105/tpc.111.086637 EPIDERMAL PATTERNING FACTOR LIKE5 peptide represses stomatal development by inhibiting meristemoid maintenance in Arabidopsis thaliana.2013 · DOI: 10.1271/bbb.130145
`At3g13898`	Controls stomatal patterning.	No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0007267	cell-cell signaling	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.407; coverage=104.651; evalue=1.28e-07; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009742	brassinosteroid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.244; coverage=63.566; evalue=1.1e-12; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010052	guard cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.545; coverage=85.271; evalue=1.02e-30; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010374	stomatal complex development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.545; coverage=85.271; evalue=1.02e-30; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048481	plant ovule development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.244; coverage=63.566; evalue=1.1e-12; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080086	stamen filament development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.407; coverage=104.651; evalue=1.28e-07; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000122	negative regulation of stomatal complex development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.407; coverage=104.651; evalue=1.28e-07; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005576	extracellular region	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.545; coverage=85.271; evalue=1.02e-30; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.895; coverage=58.915; evalue=2.98e-06; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.407; coverage=104.651; evalue=1.28e-07; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.723; coverage=78.295; evalue=8.32e-07; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048018	receptor ligand activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.407; coverage=104.651; evalue=1.28e-07; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G30370	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.407; coverage=104.651; evalue=1.28e-07	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G13898	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.895; coverage=58.915; evalue=2.98e-06	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G22820	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.723; coverage=78.295; evalue=8.32e-07	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G37810	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.545; coverage=85.271; evalue=1.02e-30	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G10310	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.244; coverage=63.566; evalue=1.1e-12	UniProtKB/Swiss-Prot DAT 2026 current_release