Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_005954 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:176301366-176302322 (+) |
| Description | Similar to ERF086: Ethylene-responsive transcription factor ERF086 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_005954 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 17 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g18560 |
Probably acts as a transcriptional activator. |
The auxin-regulated AP2/EREBP gene PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis.2007 · DOI: 10.1105/tpc.107.050674
|
At5g13910 |
Cell division-promoting factor involved in leaf blade differentiation, inflorescence branching, as well as in carpel and silique shape. | No verified direct reference in this release |
At1g28160 |
Probably acts as a transcriptional activator. | No verified direct reference in this release |
At1g12890 |
Probably acts as a transcriptional activator. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os07g0669500 |
Required to prevent the formation of axillary meristems within the spikelet meristem and permit the subsequent establishment of floral meristem identity. |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=72.642; evalue=7.83e-51; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009739 | response to gibberellin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=75.676; coverage=23.27; evalue=1.98e-33; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009740 | gibberellic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=75.676; coverage=23.27; evalue=1.98e-33; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009873 | ethylene-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=72.642; evalue=7.83e-51; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=72.642; evalue=7.83e-51; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010030 | positive regulation of seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=75.676; coverage=23.27; evalue=1.98e-33; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010102 | lateral root morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=72.642; evalue=7.83e-51; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010432 | bract development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=72.642; evalue=7.83e-51; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010451 | floral meristem growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=72.642; evalue=7.83e-51; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010582 | floral meristem determinacy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=72.642; evalue=7.83e-51; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.259; coverage=84.906; evalue=1.93e-43; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901332 | negative regulation of lateral root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=72.642; evalue=7.83e-51; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000032 | regulation of secondary shoot formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.259; coverage=84.906; evalue=1.93e-43; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=72.642; evalue=7.83e-51; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=72.642; evalue=7.83e-51; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.259; coverage=84.906; evalue=1.93e-43; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=72.642; evalue=7.83e-51; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G12890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.606; coverage=22.327; evalue=8.35e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G28160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.947; coverage=29.874; evalue=2.08e-29 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G13910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=75.676; coverage=23.27; evalue=1.98e-33 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G18560 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=72.642; evalue=7.83e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0669500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.259; coverage=84.906; evalue=1.93e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release |