Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_005260 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:159142674-159143678 (-) |
| Description | Similar to VHA-c''1: V-type proton ATPase subunit c''1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_005260 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 25 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g32530 |
Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. | No verified direct reference in this release |
At2g25610 |
Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0007035 | vacuolar acidification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.875; coverage=88.398; evalue=2.72e-58; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007042 | lysosomal lumen acidification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.875; coverage=88.398; evalue=2.72e-58; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016241 | regulation of macroautophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.875; coverage=88.398; evalue=2.72e-58; UniProt GO evidence=NAS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045851 | pH reduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.875; coverage=88.398; evalue=4.03e-58; UniProt GO evidence=IC:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048388 | endosomal lumen acidification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.875; coverage=88.398; evalue=2.72e-58; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051452 | intracellular pH reduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.875; coverage=88.398; evalue=2.72e-58; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061795 | Golgi lumen acidification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.875; coverage=88.398; evalue=2.72e-58; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902600 | proton transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.442; coverage=90.055; evalue=2.55e-58; UniProt GO evidence=ISA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.111; coverage=99.448; evalue=4.17e-111; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000220 | vacuolar proton-transporting V-type ATPase, V0 domain | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.442; coverage=90.055; evalue=2.55e-58; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.875; coverage=88.398; evalue=2.72e-58; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.442; coverage=90.055; evalue=2.55e-58; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005773 | vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.111; coverage=99.448; evalue=4.17e-111; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.111; coverage=99.448; evalue=4.17e-111; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.875; coverage=88.398; evalue=2.72e-58; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=93.567; coverage=94.475; evalue=6.82e-108; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010008 | endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.875; coverage=88.398; evalue=2.72e-58; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.111; coverage=99.448; evalue=4.17e-111; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016471 | vacuolar proton-transporting V-type ATPase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.442; coverage=90.055; evalue=2.55e-58; UniProt GO evidence=ISA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030665 | clathrin-coated vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.442; coverage=90.055; evalue=2.55e-58; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030670 | phagocytic vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.875; coverage=88.398; evalue=2.72e-58; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033176 | proton-transporting V-type ATPase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.442; coverage=90.055; evalue=2.55e-58; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033179 | proton-transporting V-type ATPase, V0 domain | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.111; coverage=99.448; evalue=4.17e-111; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008553 | P-type proton-exporting transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.442; coverage=90.055; evalue=2.55e-58; UniProt GO evidence=ISA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.111; coverage=99.448; evalue=4.17e-111; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G25610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=93.567; coverage=94.475; evalue=6.82e-108 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G32530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.111; coverage=99.448; evalue=4.17e-111 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:505684 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.875; coverage=88.398; evalue=4.03e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:533 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.875; coverage=88.398; evalue=2.72e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:114143 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.442; coverage=90.055; evalue=2.55e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release |